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ref.cfg.example
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refgroup refname ref rank taxon ncbi_tid
default default - life Prokaryote 0
zymo-cs bacillus_subtilis HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/bacillus_subtilis_pb.fasta species Bacillus subtilis 1423
zymo-cs enterococcus_faecalis HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/enterococcus_faecalis_pb.fasta species Enterococcus faecalis 1351
zymo-cs escherichia_coli HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/escherichia_coli_pb.fasta species Escherichia coli 562
zymo-cs listeria_monocytogenes HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/listeria_monocytogenes_pb.fasta species Listeria monocytogenes 1639
zymo-cs salmonella_enterica HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/salmonella_enterica_pb.fasta species Salmonella enterica 28901
zymo-cs staphylococcus_aureus HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/staphylococcus_aureus_pb.fasta species Staphylococcus aureus 1280
zymo-cs saccharomyces_cerevisiae HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/saccharomyces_cerevisiae_pb.fasta life Prokaryote 4932
zymo-cs pseudomonas_aeruginosa HTTP:raw.githubusercontent.com/LomanLab/mockcommunity/master/analysis/snakemake-assembly/mason_refs/pseudomonas_aeruginosa_pb.fasta species Pseudomonas aeruginosa 287