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Brett Johnson
-------------
Chilliwack, British Columbia, Canada
Education
---------
2013-2016
Bachelor of Science. Natural Resource Management - Wildlife and Fisheries
University of Northern British Columbia,
Prince George, BC, Canada
2011-2013
Diploma of Technology in Renewable Resources
British Columbia Institute of Technology,
Burnaby, BC, Canada
2010-2011
Certificate of Technology in Natural Resources
British Columbia Institute of Technology,
Burnaby, BC, Canada
Courses and Certifications
---------------------------------------------------
November, 2024
Professional Certificate in Computer Science for Data Science
Harvard University Online,
250 hours, 2 courses: CS50's Introduction to Computer Science, CS50's Introduction to Programming with R
https://www.edx.org/certificates/professional-certificate/harvardx-computer-science-for-data-science
August, 2023
Professional Certificate in Business Intelligence
Google,
https://www.coursera.org/professional-certificates/google-business-intelligence
May, 2023
Data Analysis and Visualization in Python for Ecologists
Data Carpentry,
https://datacarpentry.org/python-ecology-lesson/
October, 2018
Certified Data Carpentries Workshop Instructor
Simon Fraser University, BC, Canada
April, 2016
Small Vessel Operators Permit (SVOP). Quicknav Marine Training School.
North Vancouver, BC
Professional Experience
-----------------------
2024-Current
Program Head, Data Stewardship Unit
Pacific Region Science Branch,
Fisheries and Oceans Canada,
Cultus Lake, BC, Canada
2018-2024
Scientific Data Specialist
Hakai Institute/Tula Foundation,
Victoria, BC, Canada
2015-2018
Juvenile Salmon Program Lead Biologist
Hakai Institute/Tula Foundation,
Heriot Bay, BC, Canada
2014-2015
Research Assistant
University of Northern British Columbia,
Prince George, BC, Canada
2008-2013
Fish, Wildlife, and Forestry Field Technician
Watershed Management Division, Metro Vancouver,
North Vancouver, BC, Canada
Publications
------------
Peer-reviewed Literature
Johnson, B.T., T. van der Stap. 2024. Data Mobilization Through the International Year of the Salmon Ocean Observing System. North Pacific Anadromous Fish Commission Bulletin 7: 51–60. https://doi.org/10.23849/npafcb7/6a4ddpde4
Diack, D., T. Bird, A. Knight, E. de Eyto, J. Bayer, A. Walker, B.T. Johnson, T. van der Stap, M. Nevoux, C. Bull, N. Hanson, D. Brophy, M. Jones, S. Akenhead. Salmon Data Mobilization. 2023. North Pacific Anadromous Fish Commission Bulletin 7: 61–76. https://doi.org/10.23849/npafcb7/x3rlpo23a
James, S., E. Pakhomov, B. Johnson, B.P.V. Hunt. 2023. Migration timing affects the foraging ecology of Fraser River sockeye salmon stocks in coastal waters of British Columbia, Canada. Mar Ecol Prog Ser 719:93-108. https://doi.org/10.3354/meps14398
Diack, G., C. Bull, S.C. Akenhead, T. van der Stap, B.T. Johnson, E. Rivot, R. Patin, P. Hernvann, A. Schubert, T. Bird, M. Saunders, W. Crozier. 2022. Enhancing data mobilisation through a centralised data repository for Atlantic salmon (Salmon salar L): Providing the resources to promote an ecosystem-based management framework. Ecological Informatics 70: 101746. https://doi.org/10.1016/j.ecoinf.2022.101746
Garzke, J., I Forster, S.C. Godwin, B.T. Johnson, M. Krkosek, N. Mahara, E.A. Pakhomov, L.A. Rogers, B.P.V. Hunt. 2022. Dynamic coastal pelagic habitat drives rapid changes in growth and condition of juvenile sockeye salmon Oncorhynchus nerka during early marine migration. FACETS. 7: 1328-1347. https://doi.org/10.1139/facets-2022-0068
Brookson, C. B., M. Krkošek, B. P. V. Hunt, B.T. Johnson, L. A. Rogers, and S. C. Godwin. 2020. Differential infestation of juvenile pacific salmon by parasitic sea lice in British Columbia, Canada. Canadian Journal of Fisheries and Aquatic Sciences 77(12):1960–1968
Technical Reports
Johnson, B.T., K. Bachen, T. van der Stap, B.P.V. Hunt. 2022. Juvenile Salmon Migration Observations from the Hakai Institute Juvenile Salmon Program in the Discovery Islands in British Columbia, Canada in 2021. NPAFC Doc. 2038. 15pp. https://doi.org/10.5281/zenodo.6485627
Johnson, B.T., J.C.L. Gan, B.P.V. Hunt. 2021. Juvenile Salmon Migration Observations from the Hakai Institute Juvenile Salmon Program in the Discovery Islands in British Columbia, Canada in 2020. NPAFC Doc. 1943. 15 pp. (Available at https://npafc.org). https://doi.org/10.21966/e5c1-c396
Irvine, J.R., T. Beacham, C. Freshwater, S.C.H. Grant, S.G. Hinch, C. Holt, B.P.V. Hunt, B. Johnson, M. MacDuffee, V. Minke-Martin, J. Pendray, and J. Reynolds. 2020. 2020 update on Canadian research relevant to the 2016–2020 NPAFC Science Plan. NPAFC Doc. 1912. 14 pp. Fisheries and Oceans Canada, University of British Columbia, Hakai Institute, Raincoast Conservation Foundation, and Simon Fraser University (Available at https://npafc.org)
Irvine, J.R., S. Akenhead, T. Beacham, C.M. Deeg, S.C.H. Grant, K.D. Hyatt, C. Holt, B.V.P. Hunt, B.T. Johnson, J. King, K.M. Miller, and C. Neville. 2019. Update on Canadian research relevant to the 2016–2020 NPAFC Science Plan. NPAFC Doc. 1841. 6 pp. Fisheries and Oceans Canada, University of British Columbia, and Hakai Institute (Available at https://npafc.org)
Johnson, B.T., J.C.L. Gan, S.C. Godwin, M. Krkosek, and B.P.V Hunt. 2019. Juvenile salmon migration observations in the Discovery Islands and Johnstone Strait in British Columbia, Canada in 2018. NPAFC Doc. 1838. 21 pp. Hakai Institute, Institute for the Oceans and Fisheries and Department of Earth, Ocean and Atmospheric Sciences, University of British Columbia, Earth to Ocean Research Group, Simon Fraser University, Department of Ecology and Evolutionary Biology, University of Toronto, and Salmon Coast Field Station (Available at https://npafc.org)
Hunt, B.P.V., B.T. Johnson, S.C. Godwin, M. Krkosek, E.A. Pakhomov, and L. Rogers. 2018. The Hakai Institute Juvenile Salmon Program: early life history of sockeye, pink and chum salmon in British Columbia, Canada. NPAFC Doc. 1788. 14 pp. Institute for the Oceans and Fisheries and Department of Earth, Ocean and Atmospheric Sciences, University of British Columbia, Hakai Institute, Earth to Ocean Research Group, Simon Fraser University, Department of Ecology and Evolutionary Biology, University of Toronto, and Salmon Coast Field Station (Available at http://www.npafc.org)
Johnson, B.T., J.C.L. Gan, C.V. Janusson, and B.P.V. Hunt. 2018. Juvenile salmon migration dynamics in the Discovery Islands and Johnstone Strait; 2015–2017. NPAFC Doc. 1790. 10 pp. Hakai Institute, Institute for the Oceans and Fisheries and Department of Earth, Ocean and Atmospheric Sciences, University of British Columbia (Available at http://www.npafc.org)
Software and Web Services
--------
International Year of the Salmon Data Catalogue. https://data.npafc.org/dataset. Hakai Institute. Victoria, BC, Canada
International Year of the Salmon Data Portal. https://international-year-of-the-salmon.github.io/about/
Hakai Institute API R Client. https://github.com/HakaiInstitute/hakai-api-client-r. Hakai Institute. Quadra Island, BC, Canada
Juvenile Salmon Program Data Explorer. 2017. Web application (now deprecated). Quadra Island, BC, Canada
`hakaisalmon:` Hakai Institute Juvenile Salmon Program functions, templates, and helpers. R package. https://hakaiinstitute.github.io/hakaiR/. Quadra Island, BC, Canada
Books
-----
Johnson, B.T., M. Biddle, B. Best, A. Benson, Z. Montieth. 2020. Standardizing Marine Biological Data. https://ioos.github.io/bio_data_guide/intro.html. Quadra Island, BC, Canada
Johnson, B.T. 2017. Hakai Institute R Stats Guide for Reproducible Analyses. https://hecate.hakai.org/rguide/. Quadra Island, BC, Canada
Conference Presentations
------------------------
Johnson, B.T., T. van der Stap. 2023. International Year of the Salmon Data Mobilization. Poster presentation at the PICES 2023 Annual Meeting. Seaatle, USA. October 24-26, 2023. https://doi.org/10.5281/zenodo.10042430
Johnson, B.T., T. van der Stap. 2022. International Year of the Salmon Data Mobilization. Oral presentation at the International Year of the Salmon 2022 Expedition Results Meeting. Vancouver, BC. October 2-3, 2022. https://doi.org/10.5281/zenodo.7613258
Johnson, B.T., K. Bachen, T. van der Stap, B. Hunt. Mobilizing Essential Salmon Ocean Ecology Variables. Oral presentation at the American Fisheries Society 152nd Annual Meeting. Spokane, Washington. August 21-25, 2022. https://doi.org/10.5281/zenodo.7613222
Johnson, B.T., R. Brunsting, B. Hunt, E. Peterson. 2021. Mobilizing essential salmon biodiversity variables collected by the Hakai Institute Juvenile Salmon Program via the Canadian Integrated Ocean Observing System. Oral presentation at the 2021 PICES Annual Meeting: "Towards a shared vision of sustainable marine ecosystems". Virtual October 19, 2021. https://doi.org/10.5281/zenodo.7613134
Johnson, B.T., T. van der Stap, R. Brunsting, E. Peterson. 2021. Global Ocean Observation System and Essential Salmon Ocean Ecology Variables. Oral presentation at the Third North Pacific Anadromous Fish Commission International Year of the Salmon Virtual Workshop on the Linkages between Pacific Salmon Production and Environmental Changes. Virtual May 25-27, 2021. https://doi.org/10.5281/zenodo.7613080
Johnson, B.T., R Brunsting, B.P.V Hunt, M. Saunders, E. Peterson. 2020. The Global Ocean Observation System and Essential Salmon Ocean Ecology Variables. Oral presentation at the Salmon Ocean Ecology Meeting at Stanford's John Hopkins Marine Research Laboratory. Monterrey Bay, CA, USA
Johnson, B.T., J.C.L. Gan, C.V. Janusson, B.P.V. Hunt. Hakai Institute Juvenile Salmon Program Time Series Poster. Poster presentation at the Salmon Ocean Ecology Meeting/North Pacific Anadromous Fish Commission Meeting. Portland Oregon, 2019
Johnson, B.T., J.C.L. Gan, C.V. Janusson, B.P.V. Hunt. Hakai Institute Juvenile Salmon Program 2015-2018 Time Series Poster. Poster presentation at Fisheries and Oceans Canada State of the Pacific Ocean meeting. Nanaimo, BC, Canada
Johnson, B.T. 2018. Hakai Institute Juvenile Salmon Program Overview. Oral presentation at the Pint of Salmon Science community event held at the Riptide Pub, Campbell River, BC, Canada
Johnson, B.T., J. Jackson, B.P.V. Hunt., A. Hare, W. Evans. Quadra Island Ecological Observatory; Ocean Conditions, Juvenile Salmon Migrations, and Data Management. Oral presentation at the BCSFA Research Priorities Workshop, Courtenay, B.C.
Johnson, B.T., C. Neville, B.P.V. Hunt. 2018. Fine scale migration dynamics of juvenile sockeye in the Discovery Islands, B.C. Oral presentation at the Salmon Ocean Ecology Meeting. Newport, Oregon
Johnson, B.T., J.C.L. Gan, C.V. Janusson, B.P.V. Hunt. 2017. Hakai Institute Juvenile Salmon Program 2015-2017 Time Series Poster. Poster presentation at the Pacific Salmon Foundation Salish Sea Marine Survival Project juvenile salmon work group. Nanaimo, BC, Canada
Johnson, B.T., J.C.L. Gan, C.V. Janusson, B.P.V. Hunt. 2017. Hakai Institute Juvenile Salmon Program 2015-2016 Time Series Poster. Poster presentation at Fisheries and Oceans Canada State of the Pacific Ocean meeting. Sidney, BC, Canada
Johnson, B.T. 2016. Hakai Institute Juvenile Salmon Program highlights 2015-2016. Hakai Institute Research Exchange. Nanaimo, BC, Canada
Hunt, B.P.V., B.T. Johnson. Juvenile Salmon Program review; ocean conditions and fish condition analysis. Pacific Salmon Foundation Salish Sea Marine Survival Project Canadian meeting. Nanaimo, BC, Canada
Working Groups and Committees
-----------------------------
2024-Current PICES Advisory Panel: United Nations Decade of Ocean Science https://meetings.pices.int/members/advisory-panels/AP-UNDOS
2024-Current Research Data Alliance Salmon Research and Monitoring Interest Group https://www.rd-alliance.org/groups/salmon-research-and-monitoring-ig/
2023-Current
Co-chair PICES Working Group 52 - Data Management: Established to address the need for an enhanced data, metadata, information management and data sharing plan within the North Pacific Marine Science Organization (PICES).
2022-2023
PICES Study Group: Encouraging Data Awareness and increased Transmission and Accessibility (SG-DATA). North Pacific Marine Science Organization (PICES)
2020-Current
PICES-TCODE. Canadian Representative for the North Pacific Marine Science Organization (PICES) Technical Committee on Data Exchange (TCODE)
2019-2024
Biological Data Standardization Task Team for the Canadian Integrated Ocean Observing System. Collaboration with Fisheries and Oceans Canada, Ocean Networks Canada, Dalhousie University, Saint Lawrence Gulf Observatory and the Hakai Institute
2019-2022
International Year of the Salmon Data Mobilization Working Group. A collaboration between the US National Centre for Ecological Analysis and Synthesis, the North Atlantic Salmon Conservation Organization, Fisheries and Oceans Canada, and the Hakai Institute with the goal of defining methods and technologies for integrating and mobilizing international salmon data
2019-2022
North Pacific Anadromous Fisheries Commission International Year of the Salmon Steering Committee and Working Group
2019-2021
Metadata Profile Task Team for the Canadian Integrated Ocean Observing System. Collaboration with Fisheries and Oceans Canada, Ocean Networks Canada, Dalhousie University, Saint Lawrence Gulf Observatory and the Hakai Institute
2019-2021
Data Management Policy Task Team for the Canadian Integrated Ocean Observing System. Collaboration with Fisheries and Oceans Canada, Ocean Networks Canada, Dalhousie University, Saint Lawrence Gulf Observatory and the Hakai Institute
Professional Memberships
------------------------
March 2021-Current
Registered Professional Biologist.
British Columbia College of Applied Biology. Registration No. 3719
Professional Content
-------------------
GitHub: https://github.com/Br-Johnson
Blog: https://br-johnson.github.io/