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merged-kg_stats.yaml
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edge_stats:
count_by_predicates:
biolink:active_in:
count: 196960
biolink:causes:
count: 2
biolink:coexists_with:
count: 13
biolink:decreases_expression_of:
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biolink:develops_from:
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biolink:enables:
count: 333076
biolink:expressed_in:
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biolink:has_attribute:
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biolink:has_part:
count: 129
biolink:has_participant:
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biolink:has_phenotype:
count: 2561504
biolink:in_taxon:
count: 340298
biolink:increases_expression_of:
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biolink:interacts_with:
count: 103
biolink:located_in:
count: 4
biolink:negatively_regulates:
count: 2765
biolink:occurs_in:
count: 1
biolink:orthologous_to:
count: 71983
biolink:part_of:
count: 7921
biolink:participates_in:
count: 30
biolink:positively_regulates:
count: 2766
biolink:preceded_by:
count: 20
biolink:precedes:
count: 3
biolink:produces:
count: 1
biolink:regulates:
count: 290194
biolink:related_to:
count: 287
biolink:subclass_of:
count: 97010
unknown:
count: 0
count_by_spo:
biolink:AnatomicalEntity-biolink:coexists_with-biolink:AnatomicalEntity:
count: 11
biolink:AnatomicalEntity-biolink:coexists_with-biolink:OntologyClass:
count: 11
biolink:AnatomicalEntity-biolink:develops_from-biolink:AnatomicalEntity:
count: 133
biolink:AnatomicalEntity-biolink:develops_from-biolink:OntologyClass:
count: 133
biolink:AnatomicalEntity-biolink:has_part-biolink:AnatomicalEntity:
count: 41
biolink:AnatomicalEntity-biolink:has_part-biolink:OntologyClass:
count: 41
biolink:AnatomicalEntity-biolink:in_taxon-biolink:OrganismalEntity:
count: 2
biolink:AnatomicalEntity-biolink:located_in-biolink:AnatomicalEntity:
count: 4
biolink:AnatomicalEntity-biolink:located_in-biolink:OntologyClass:
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biolink:AnatomicalEntity-biolink:part_of-biolink:AnatomicalEntity:
count: 720
biolink:AnatomicalEntity-biolink:part_of-biolink:OntologyClass:
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biolink:AnatomicalEntity-biolink:participates_in-biolink:LifeStage:
count: 30
biolink:AnatomicalEntity-biolink:participates_in-biolink:OntologyClass:
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biolink:AnatomicalEntity-biolink:related_to-biolink:AnatomicalEntity:
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biolink:AnatomicalEntity-biolink:related_to-biolink:OntologyClass:
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biolink:AnatomicalEntity-biolink:subclass_of-biolink:AnatomicalEntity:
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biolink:AnatomicalEntity-biolink:subclass_of-biolink:OntologyClass:
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biolink:BiologicalProcess-biolink:has_part-biolink:BiologicalProcess:
count: 2
biolink:BiologicalProcess-biolink:has_part-biolink:OntologyClass:
count: 2
biolink:BiologicalProcess-biolink:negatively_regulates-biolink:BiologicalProcess:
count: 2765
biolink:BiologicalProcess-biolink:negatively_regulates-biolink:OntologyClass:
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biolink:BiologicalProcess-biolink:part_of-biolink:BiologicalProcess:
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biolink:BiologicalProcess-biolink:positively_regulates-biolink:BiologicalProcess:
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biolink:BiologicalProcess-biolink:positively_regulates-biolink:OntologyClass:
count: 41
biolink:BiologicalProcess-biolink:regulates-biolink:BiologicalProcess:
count: 3212
biolink:BiologicalProcess-biolink:regulates-biolink:MolecularActivity:
count: 9
biolink:BiologicalProcess-biolink:regulates-biolink:MolecularFunction:
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biolink:BiologicalProcess-biolink:subclass_of-biolink:BiologicalProcess:
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biolink:BiologicalProcess-biolink:subclass_of-biolink:OntologyClass:
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biolink:CellularComponent-biolink:has_part-biolink:CellularComponent:
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biolink:CellularComponent-biolink:has_part-biolink:OntologyClass:
count: 2
biolink:CellularComponent-biolink:part_of-biolink:CellularComponent:
count: 1974
biolink:CellularComponent-biolink:part_of-biolink:OntologyClass:
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count: 4838
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count: 66
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count: 249
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count: 1311
biolink:ChemicalSubstance-biolink:subclass_of-biolink:NamedThing:
count: 2
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biolink:EnvironmentalExposure-None-biolink:GenomicEntity:
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biolink:EnvironmentalExposure-biolink:decreases_expression_of-biolink:GenomicEntity:
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biolink:GenomicEntity-biolink:active_in-biolink:CellularComponent:
count: 196960
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count: 44610
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count: 850660
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count: 13195
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count: 224136
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count: 15
biolink:LifeStage-biolink:has_participant-biolink:OntologyClass:
count: 15
biolink:LifeStage-biolink:part_of-biolink:LifeStage:
count: 16
biolink:LifeStage-biolink:part_of-biolink:OntologyClass:
count: 16
biolink:LifeStage-biolink:preceded_by-biolink:LifeStage:
count: 20
biolink:LifeStage-biolink:preceded_by-biolink:OntologyClass:
count: 20
biolink:LifeStage-biolink:precedes-biolink:LifeStage:
count: 3
biolink:LifeStage-biolink:precedes-biolink:OntologyClass:
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biolink:LifeStage-biolink:subclass_of-biolink:LifeStage:
count: 297
biolink:LifeStage-biolink:subclass_of-biolink:NamedThing:
count: 42
biolink:LifeStage-biolink:subclass_of-biolink:OntologyClass:
count: 320
biolink:MolecularActivity-biolink:has_part-biolink:MolecularActivity:
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biolink:MolecularActivity-biolink:has_part-biolink:MolecularFunction:
count: 2
biolink:MolecularActivity-biolink:has_part-biolink:OntologyClass:
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biolink:MolecularActivity-biolink:part_of-biolink:BiologicalProcess:
count: 3
biolink:MolecularActivity-biolink:part_of-biolink:MolecularActivity:
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biolink:MolecularActivity-biolink:part_of-biolink:MolecularFunction:
count: 5
biolink:MolecularActivity-biolink:part_of-biolink:OntologyClass:
count: 3
biolink:MolecularActivity-biolink:positively_regulates-biolink:MolecularActivity:
count: 2
biolink:MolecularActivity-biolink:positively_regulates-biolink:MolecularFunction:
count: 2
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count: 2
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count: 3
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count: 3
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count: 13597
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count: 1162
biolink:MolecularFunction-biolink:part_of-biolink:BiologicalProcess:
count: 2
biolink:MolecularFunction-biolink:part_of-biolink:MolecularActivity:
count: 3
biolink:MolecularFunction-biolink:part_of-biolink:MolecularFunction:
count: 2
biolink:MolecularFunction-biolink:part_of-biolink:OntologyClass:
count: 2
biolink:MolecularFunction-biolink:positively_regulates-biolink:MolecularActivity:
count: 1
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count: 1
biolink:MolecularFunction-biolink:positively_regulates-biolink:OntologyClass:
count: 1
biolink:MolecularFunction-biolink:regulates-biolink:MolecularActivity:
count: 1
biolink:MolecularFunction-biolink:regulates-biolink:MolecularFunction:
count: 1
biolink:MolecularFunction-biolink:regulates-biolink:OntologyClass:
count: 1
biolink:MolecularFunction-biolink:subclass_of-biolink:MolecularActivity:
count: 3772
biolink:MolecularFunction-biolink:subclass_of-biolink:MolecularFunction:
count: 2744
biolink:MolecularFunction-biolink:subclass_of-biolink:NamedThing:
count: 1
biolink:MolecularFunction-biolink:subclass_of-biolink:OntologyClass:
count: 385
biolink:NamedThing-None-biolink:NamedThing:
count: 13
biolink:NamedThing-None-biolink:OntologyClass:
count: 13
biolink:NamedThing-biolink:subclass_of-biolink:ChemicalSubstance:
count: 2
biolink:NamedThing-biolink:subclass_of-biolink:NamedThing:
count: 11
biolink:NamedThing-biolink:subclass_of-biolink:OntologyClass:
count: 9
biolink:NamedThing-biolink:subclass_of-biolink:OrganismalEntity:
count: 4
biolink:OntologyClass-None-biolink:NamedThing:
count: 4
biolink:OntologyClass-None-biolink:OntologyClass:
count: 146
biolink:OntologyClass-biolink:causes-biolink:OntologyClass:
count: 2
biolink:OntologyClass-biolink:coexists_with-biolink:AnatomicalEntity:
count: 11
biolink:OntologyClass-biolink:coexists_with-biolink:OntologyClass:
count: 13
biolink:OntologyClass-biolink:decreases_expression_of-biolink:GenomicEntity:
count: 4960
biolink:OntologyClass-biolink:develops_from-biolink:AnatomicalEntity:
count: 133
biolink:OntologyClass-biolink:develops_from-biolink:OntologyClass:
count: 133
biolink:OntologyClass-biolink:has_attribute-biolink:OntologyClass:
count: 5
biolink:OntologyClass-biolink:has_part-biolink:AnatomicalEntity:
count: 41
biolink:OntologyClass-biolink:has_part-biolink:BiologicalProcess:
count: 2
biolink:OntologyClass-biolink:has_part-biolink:CellularComponent:
count: 2
biolink:OntologyClass-biolink:has_part-biolink:ChemicalSubstance:
count: 2
biolink:OntologyClass-biolink:has_part-biolink:LifeStage:
count: 1
biolink:OntologyClass-biolink:has_part-biolink:MolecularActivity:
count: 2
biolink:OntologyClass-biolink:has_part-biolink:MolecularFunction:
count: 2
biolink:OntologyClass-biolink:has_part-biolink:OntologyClass:
count: 60
biolink:OntologyClass-biolink:has_part-biolink:OrganismalEntity:
count: 1
biolink:OntologyClass-biolink:has_part-biolink:PhenotypicFeature:
count: 4
biolink:OntologyClass-biolink:has_participant-biolink:AnatomicalEntity:
count: 15
biolink:OntologyClass-biolink:has_participant-biolink:OntologyClass:
count: 19
biolink:OntologyClass-biolink:in_taxon-biolink:OrganismalEntity:
count: 2
biolink:OntologyClass-biolink:increases_expression_of-biolink:GenomicEntity:
count: 5562
biolink:OntologyClass-biolink:located_in-biolink:AnatomicalEntity:
count: 4
biolink:OntologyClass-biolink:located_in-biolink:OntologyClass:
count: 4
biolink:OntologyClass-biolink:occurs_in-biolink:OntologyClass:
count: 1
biolink:OntologyClass-biolink:part_of-biolink:AnatomicalEntity:
count: 720
biolink:OntologyClass-biolink:part_of-biolink:BiologicalProcess:
count: 22
biolink:OntologyClass-biolink:part_of-biolink:CellularComponent:
count: 15
biolink:OntologyClass-biolink:part_of-biolink:LifeStage:
count: 16
biolink:OntologyClass-biolink:part_of-biolink:OntologyClass:
count: 857
biolink:OntologyClass-biolink:part_of-biolink:PhenotypicFeature:
count: 41
biolink:OntologyClass-biolink:participates_in-biolink:LifeStage:
count: 30
biolink:OntologyClass-biolink:participates_in-biolink:OntologyClass:
count: 30
biolink:OntologyClass-biolink:positively_regulates-biolink:BiologicalProcess:
count: 32
biolink:OntologyClass-biolink:positively_regulates-biolink:MolecularActivity:
count: 11
biolink:OntologyClass-biolink:positively_regulates-biolink:MolecularFunction:
count: 11
biolink:OntologyClass-biolink:positively_regulates-biolink:OntologyClass:
count: 43
biolink:OntologyClass-biolink:preceded_by-biolink:LifeStage:
count: 20
biolink:OntologyClass-biolink:preceded_by-biolink:OntologyClass:
count: 20
biolink:OntologyClass-biolink:precedes-biolink:LifeStage:
count: 3
biolink:OntologyClass-biolink:precedes-biolink:OntologyClass:
count: 3
biolink:OntologyClass-biolink:regulates-biolink:BiologicalProcess:
count: 42
biolink:OntologyClass-biolink:regulates-biolink:MolecularActivity:
count: 12
biolink:OntologyClass-biolink:regulates-biolink:MolecularFunction:
count: 12
biolink:OntologyClass-biolink:regulates-biolink:OntologyClass:
count: 54
biolink:OntologyClass-biolink:related_to-biolink:AnatomicalEntity:
count: 27
biolink:OntologyClass-biolink:related_to-biolink:OntologyClass:
count: 38
biolink:OntologyClass-biolink:subclass_of-biolink:AnatomicalEntity:
count: 1475
biolink:OntologyClass-biolink:subclass_of-biolink:BiologicalProcess:
count: 271
biolink:OntologyClass-biolink:subclass_of-biolink:CellularComponent:
count: 27
biolink:OntologyClass-biolink:subclass_of-biolink:LifeStage:
count: 297
biolink:OntologyClass-biolink:subclass_of-biolink:MolecularActivity:
count: 44
biolink:OntologyClass-biolink:subclass_of-biolink:MolecularFunction:
count: 36
biolink:OntologyClass-biolink:subclass_of-biolink:NamedThing:
count: 421
biolink:OntologyClass-biolink:subclass_of-biolink:OntologyClass:
count: 5158
biolink:OntologyClass-biolink:subclass_of-biolink:PhenotypicFeature:
count: 1221
biolink:OrganismTaxon-biolink:has_phenotype-biolink:OntologyClass:
count: 2104
biolink:OrganismTaxon-biolink:has_phenotype-biolink:PhenotypicFeature:
count: 1948
biolink:OrganismTaxon-biolink:interacts_with-biolink:OrganismTaxon:
count: 103
biolink:OrganismTaxon-biolink:produces-biolink:ChemicalEntity:
count: 1
biolink:OrganismTaxon-biolink:subclass_of-biolink:OrganismTaxon:
count: 4949
biolink:OrganismTaxon-biolink:subclass_of-biolink:OrganismalEntity:
count: 8
biolink:OrganismalEntity-biolink:has_phenotype-biolink:OntologyClass:
count: 2547142
biolink:OrganismalEntity-biolink:has_phenotype-biolink:PhenotypicFeature:
count: 2546975
biolink:OrganismalEntity-biolink:in_taxon-biolink:OrganismTaxon:
count: 116160
biolink:OrganismalEntity-biolink:in_taxon-biolink:OrganismalEntity:
count: 112188
biolink:OrganismalEntity-biolink:subclass_of-biolink:NamedThing:
count: 11
biolink:OrganismalEntity-biolink:subclass_of-biolink:OntologyClass:
count: 29
biolink:OrganismalEntity-biolink:subclass_of-biolink:OrganismTaxon:
count: 3
biolink:OrganismalEntity-biolink:subclass_of-biolink:OrganismalEntity:
count: 14416
biolink:PhenotypicFeature-biolink:has_part-biolink:OntologyClass:
count: 1
biolink:PhenotypicFeature-biolink:part_of-biolink:OntologyClass:
count: 34
biolink:PhenotypicFeature-biolink:part_of-biolink:PhenotypicFeature:
count: 18
biolink:PhenotypicFeature-biolink:related_to-biolink:AnatomicalEntity:
count: 10
biolink:PhenotypicFeature-biolink:related_to-biolink:OntologyClass:
count: 10
biolink:PhenotypicFeature-biolink:subclass_of-biolink:OntologyClass:
count: 690
biolink:PhenotypicFeature-biolink:subclass_of-biolink:PhenotypicFeature:
count: 340
predicates:
- biolink:active_in
- biolink:causes
- biolink:coexists_with
- biolink:decreases_expression_of
- biolink:develops_from
- biolink:enables
- biolink:expressed_in
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- biolink:has_part
- biolink:has_participant
- biolink:has_phenotype
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- biolink:interacts_with
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- biolink:occurs_in
- biolink:orthologous_to
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- biolink:preceded_by
- biolink:precedes
- biolink:produces
- biolink:regulates
- biolink:related_to
- biolink:subclass_of
total_edges: 5325487
graph_name: Merged Graph
node_stats:
count_by_category:
biolink:AnatomicalEntity:
count: 1450
biolink:BiologicalProcess:
count: 30516
biolink:CellularComponent:
count: 4479
biolink:ChemicalEntity:
count: 1
biolink:ChemicalSubstance:
count: 919
biolink:EnvironmentalExposure:
count: 5
biolink:GenomicEntity:
count: 224751
biolink:LifeStage:
count: 338
biolink:MolecularActivity:
count: 12284
biolink:MolecularFunction:
count: 3005
biolink:NamedThing:
count: 47
biolink:OntologyClass:
count: 8176
biolink:OrganismTaxon:
count: 5050
biolink:OrganismalEntity:
count: 130772
biolink:PhenotypicFeature:
count: 486
unknown:
count: 0
count_by_id_prefixes:
BFO: 20
CARO: 3
CHEBI: 921
ENVO: 58
EOL: 5038
FOODON: 5
GERMPLASM: 116160
GO: 53952
GR: 8
IAO: 4
NCBITaxon: 14628
OBI: 1
OBO: 43
OIO: 17
OsAMT1: 2
PATO: 137
PECO: 118
PO: 3779
RO: 127
TO: 2514
UniProtKB: 124
gene: 1
locus: 2165
owl: 2
count_by_id_prefixes_by_category:
biolink:AnatomicalEntity:
PO: 1450
biolink:BiologicalProcess:
GO: 30516
biolink:CellularComponent:
GO: 4479
biolink:ChemicalEntity:
CHEBI: 1
biolink:ChemicalSubstance:
CHEBI: 919
biolink:EnvironmentalExposure:
PECO: 4
biolink:GenomicEntity:
GR: 8
OsAMT1: 2
UniProtKB: 124
gene: 1
locus: 2165
biolink:LifeStage:
PO: 338
biolink:MolecularActivity:
GO: 12284
biolink:MolecularFunction:
GO: 3005
biolink:NamedThing:
CHEBI: 1
ENVO: 12
NCBITaxon: 4
OBO: 5
PATO: 3
RO: 20
owl: 2
biolink:OntologyClass:
BFO: 20
CARO: 3
ENVO: 46
FOODON: 5
GO: 3668
IAO: 4
OBI: 1
OBO: 38
OIO: 17
PATO: 134
PECO: 114
PO: 1991
RO: 107
TO: 2028
biolink:OrganismTaxon:
EOL: 5038
NCBITaxon: 12
biolink:OrganismalEntity:
GERMPLASM: 116160
NCBITaxon: 14612
biolink:PhenotypicFeature:
TO: 486
unknown: {}
node_categories:
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- biolink:CellularComponent
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- biolink:OrganismTaxon
- biolink:OrganismalEntity
- biolink:PhenotypicFeature
node_id_prefixes: !!set
BFO: null
CARO: null
CHEBI: null
ENVO: null
EOL: null
FOODON: null
GERMPLASM: null
GO: null
GR: null
IAO: null
NCBITaxon: null
OBI: null
OBO: null
OIO: null
OsAMT1: null
PATO: null
PECO: null
PO: null
RO: null
TO: null
UniProtKB: null
gene: null
locus: null
owl: null
node_id_prefixes_by_category:
biolink:AnatomicalEntity: !!set
PO: null
biolink:BiologicalProcess: !!set
GO: null
biolink:CellularComponent: !!set
GO: null
biolink:ChemicalEntity: !!set
CHEBI: null
biolink:ChemicalSubstance: !!set
CHEBI: null
biolink:EnvironmentalExposure: !!set
PECO: null
biolink:GenomicEntity: !!set
GR: null
OsAMT1: null
UniProtKB: null
gene: null
locus: null
biolink:LifeStage: !!set
PO: null
biolink:MolecularActivity: !!set
GO: null
biolink:MolecularFunction: !!set
GO: null
biolink:NamedThing: !!set
CHEBI: null
ENVO: null
NCBITaxon: null
OBO: null
PATO: null
RO: null
owl: null
biolink:OntologyClass: !!set
BFO: null
CARO: null
ENVO: null
FOODON: null
GO: null
IAO: null
OBI: null
OBO: null
OIO: null
PATO: null
PECO: null
PO: null
RO: null
TO: null
biolink:OrganismTaxon: !!set
EOL: null
NCBITaxon: null
biolink:OrganismalEntity: !!set
GERMPLASM: null
NCBITaxon: null
biolink:PhenotypicFeature: !!set
TO: null
unknown: !!set {}
total_nodes: 416691