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pride_cv.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/pride.owl#"
xml:base="http://purl.obolibrary.org/obo/pride.owl"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:efo="http://www.ebi.ac.uk/efo/#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:chmo="http://purl.obolibrary.org/obo/chmo#"
xmlns:core="http://purl.obolibrary.org/obo/uberon/core#"
xmlns:efo1="http://www.ebi.ac.uk/efo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:obo2="http://purl.obolibrary.org/obo#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:chebi="http://purl.obolibrary.org/obo/chebi/"
xmlns:mondo="http://purl.obolibrary.org/obo/mondo#"
xmlns:sssom="https://w3id.org/sssom/"
xmlns:terms="http://purl.org/dc/terms/"
xmlns:vocab="https://w3id.org/semapv/vocab/"
xmlns:chebi3="http://purl.obolibrary.org/obo/chebi#"
xmlns:chebi4="http://purl.obolibrary.org/obo/chebi#2"
xmlns:chebi5="http://purl.obolibrary.org/obo/chebi#3"
xmlns:chebi6="http://purl.obolibrary.org/obo/chebi#1"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:patterns="http://www.co-ode.org/patterns#"
xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/pride.owl">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/pride/2.1.8/pride.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/chmo.owl"/>
<owl:imports rdf:resource="http://www.ebi.ac.uk/efo/efo.owl"/>
<oboInOwl:auto-generated-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBO-Edit 2.3.1</oboInOwl:auto-generated-by>
<oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">16:01:2025 14:06</oboInOwl:date>
<oboInOwl:default-namespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:default-namespace>
<oboInOwl:hasOBOFormatVersion rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.4</oboInOwl:hasOBOFormatVersion>
<oboInOwl:saved-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Deepti Jaiswal Kundu</oboInOwl:saved-by>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">I would set treat-xrefs-as-equivalent but there are some weird xrefs that would break that behaviour (PRIDE:PRIDE, value-type:xsd:string, ...)</rdfs:comment>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">definition</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#auto-generated-by -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#auto-generated-by"/>
<!-- http://www.geneontology.org/formats/oboInOwl#creation_date -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#creation_date"/>
<!-- http://www.geneontology.org/formats/oboInOwl#date -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#date"/>
<!-- http://www.geneontology.org/formats/oboInOwl#default-namespace -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#default-namespace"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDbXref -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">database_cross_reference</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_exact_synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_obo_format_version</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasOBONamespace -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_obo_namespace</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym">
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_related_synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#id -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
<!-- http://www.geneontology.org/formats/oboInOwl#saved-by -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#saved-by"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment"/>
<!-- http://www.w3.org/2000/01/rdf-schema#label -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#label"/>
<!-- http://www.w3.org/2002/07/owl#deprecated -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2002/07/owl#deprecated"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/PRIDE_part_of -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/PRIDE_part_of">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">http://purl.obolibrary.org/obo/PRIDE_part_of</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">part_of</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/pride#has_units -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/pride#has_units">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_units</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">has_units</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/pride#part_of -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/pride#part_of">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">part_of</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">part_of</rdfs:label>
</owl:ObjectProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/MS_1000044 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1000044">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Fragmentation method used for dissociation or fragmentation</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1000044</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">dissociation method</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1000044"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Fragmentation method used for dissociation or fragmentation</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/MS_1000045 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1000045">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Energy for an ion experiencing collision with a stationary gas particle resulting in dissociation of the ion.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1000045</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">collision energy</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1000045"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Energy for an ion experiencing collision with a stationary gas particle resulting in dissociation of the ion.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/MS_1000451 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1000451">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000547"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">mass analyzer</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1000451</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">mass analyzer</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1000451"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">mass analyzer</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/MS_1002038 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1002038">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000514"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A sample that has not been labelled or modified</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1002038</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">label free sample</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1002038"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A sample that has not been labelled or modified</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/NCIT_C69199 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/NCIT_C69199">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000470"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The date on which data creation began [NCI]</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">NCIT:C69199</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Content Creation date</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/NCIT_C69199"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The date on which data creation began [NCI]</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000000 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000000">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000000</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to Reference additional parameters, in the context of ExperimentCollection/Experiment/Reference/additional/CvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reference additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000001 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000001">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000001</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of a protocol as ordered steps, in relation to the PRIDE.xml element ExperimentCollection/Experiment/Protocol/ProtocolSteps/StepDescription</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Protocol step description additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000002 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000002">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000002</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of a ModificationItem (post translational modification or artifactual modification) in relation to the PRIDE.xml element ExperimentCollection/Experiment/Identification/PeptideItem/ModificationItem/additional/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ModificationItem additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000003 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000003">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000003</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of a PeptideItem in relation to the PRIDE.xml element ExperimentCollection/Experiment/Identification/PeptideItem/additional/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Peptide item additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000004 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000004">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000004</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of an Identification in relation to the PRIDE.xml element ExperimentCollection/Experiment/Identification/additional/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Identification additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000005 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000005">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000005</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of a Gel in relation to the PRIDE.xml element ExperimentCollection/Experiment/TwoDimensionalIdentification/Gel/additional/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Gel additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000006 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000006">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000006</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root node for terms relating to the description of an Experiment in relation to the PRIDE.xml element ExperimentCollection/Experiment/additional/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Experiment additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000007">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000007</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Version number / identifier for search engine.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">SearchEngineVersion</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000008 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000008">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000004"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000008</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Protein search engine output parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000009 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000009">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000008"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000009</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Ion mass tolerance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000010 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000010">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000009"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000010</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PrecursorIon mass tolerance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000011">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000009"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000011</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS2 ion mass tolerance</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000012 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000012">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000008"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/pride#part_of"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000045"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.0 - normalized correlation score.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000012</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Delta Cn</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000012"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.0 - normalized correlation score.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000013 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000013">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000008"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000013</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">X correlation</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000014 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000014">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000013"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000014</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">X correlation (+1)</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000015 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000015">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000013"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000015</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">X correlation (+2)</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000016 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000016">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000013"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000016</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">X correlation (+3)</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000017 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000017">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000017</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Root term for parameters in the context of ExperimentCollection/Experiment/mzData/description/admin/sampleDescription/cvParam</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Sample description additional parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000018 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000018">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000017"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000018</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Term to describe the fact that the sample derives from an organism which has been positively shown to be free of disease, e.g. as the consequence of a broad-spectrum screen. NOTE: A request has been made to have this concept added to MeSH. Once this has been achieved, this term will be dropped from the PRIDE CV and all uses of the this term will be updated to the appropriate MeSH concept.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Disease free</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000019 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000019">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">To make something soluble or more soluble, especially in water, by the action of a detergent or other agent.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000019</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Solubilization</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000019"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">To make something soluble or more soluble, especially in water, by the action of a detergent or other agent.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000020 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000020">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The removal of specific components of a complex mixture of proteins or peptides on the basis of some specific property of those components.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000020</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Depletion</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000020"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The removal of specific components of a complex mixture of proteins or peptides on the basis of some specific property of those components.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000021 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000021">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process of classification of an analyte or a group of analytes from a sample according to physical (e.g., size) or chemical (e.g., bonding, reactivity) properties. (from https://doi.org/10.1351/goldbook.FT06825)</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000021</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Fractionation</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000021"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Process of classification of an analyte or a group of analytes from a sample according to physical (e.g., size) or chemical (e.g., bonding, reactivity) properties. (from https://doi.org/10.1351/goldbook.FT06825)</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000022 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000022">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">To separate a complex mixture of proteins or peptides based on molecular characteristics and interaction type over a given amount of time.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000022</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Separation</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000022"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">To separate a complex mixture of proteins or peptides based on molecular characteristics and interaction type over a given amount of time.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000023 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000023">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The removal of a region of a gel which contains protein(s) of interest.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000023</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Band excision</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000023"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The removal of a region of a gel which contains protein(s) of interest.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000024 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000024">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The fragmentation of proteins into peptides through the use of an enzyme such as trypsin.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000024</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Enzyme digestion</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000024"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The fragmentation of proteins into peptides through the use of an enzyme such as trypsin.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000025 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000025">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000025</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reduction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000026 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The transfer of an alkyl group from one molecule to another.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000026</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alkylation</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000026"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The transfer of an alkyl group from one molecule to another.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This is a measuring method consisting of turning elements in a sample into ions, isolating them according to the ratio between the mass and charge numbers and detecting it electrically.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000027</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Mass spectrometry</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000027"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This is a measuring method consisting of turning elements in a sample into ions, isolating them according to the ratio between the mass and charge numbers and detecting it electrically.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000028 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000028">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000028</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid values for cvLabel entries referencing external database / CV / ontology.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Cv Label</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000029 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000029</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing PubMed.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000030">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000030</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing PRIDE</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000031 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000031">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000031</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing GO.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GO</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000032 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000032">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000032</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing Medical Subject Headings (MeSH)</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MeSH</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000033 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000033">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000033</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing NEWT or the NCBI taxonomy.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">NEWT</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000034 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000034">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000034</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing the PSI ontology</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PSI</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000035 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000035">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000035</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing UNIMOD</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">UNIMOD</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000036 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000036">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000036</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing RESID.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">RESID</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000037 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000037">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000037</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Staining</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000038 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000038">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000038</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Valid value for the cvLabel entry referencing ISBN</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ISBN</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000039 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000039">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000001"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Any technique which separates differentiated structures from the cell.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000039</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Organelle isolation</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000039"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Any technique which separates differentiated structures from the cell.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000040 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000040">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000006"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000040</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This CV term should be used in association with a value that is a free-text description of the experiment.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Experiment description</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000041 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000041">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000004"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000041</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Search database protein sequence</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000042 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000042">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000042</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DOI</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000043 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000043">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000028"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000043</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FIX</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000044 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000044">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000044</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Search algorithm</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000045 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000045">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000044"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000573"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000045</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Sequest</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000046 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000046">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000044"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000571"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000573"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000046</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Mascot</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000047 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000047">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000044"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000573"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000047</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Really X</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">XTandem</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000048 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000048">
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000048</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OutputParameter</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000049 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000049">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000003"/>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000049</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Peptide search engine output parameter</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000050 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000050">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/pride#part_of"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000045"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Final correlation score rank and preliminary score rank.</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000050</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Rank/Sp</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000050"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Final correlation score rank and preliminary score rank.</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000051 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000051">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/pride#part_of"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000045"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">m/z of the singly-charged precursor (precursor mass + mass of hydrogen atom).</obo:IAO_0000115>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:0000051</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">(M+H)+</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000051"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">m/z of the singly-charged precursor (precursor mass + mass of hydrogen atom).</owl:annotatedTarget>
<oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PRIDE:PRIDE</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/PRIDE_0000052 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/PRIDE_0000052">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PRIDE_0000049"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/pride#part_of"/>