diff --git a/WebProtege/digitrubber-full.owl b/WebProtege/digitrubber-full.owl index 3b0888f..fca800c 100644 --- a/WebProtege/digitrubber-full.owl +++ b/WebProtege/digitrubber-full.owl @@ -87,19 +87,25 @@ - + + BFO OWL specification label + - + + BFO CLIF specification label + - + + editor preferred term + @@ -170,13 +176,17 @@ We also have the outstanding issue of how to aim different definitions to differ - + + editor note + - + + term editor + @@ -211,19 +221,25 @@ We also have the outstanding issue of how to aim different definitions to differ - + + curator note + - + + term tracker item + - + + ontology term requester + @@ -244,43 +260,57 @@ We also have the outstanding issue of how to aim different definitions to differ - + + expand expression to + - + + OBO foundry unique label + - + + elucidation + - + + has associated axiom(nl) + - + + has associated axiom(fol) + - + + has ontology root term + - + + has axiom label + @@ -326,6 +356,7 @@ https://sourceforge.net/tracker/?func=detail&aid=3603413&group_id=177891 + defined by inverse @@ -361,7 +392,9 @@ Where we have an annotation assertion - + + is indirect form of + @@ -397,6 +430,7 @@ Where we have an annotation assertion + valid_for_go_annotation_extension @@ -405,6 +439,7 @@ Where we have an annotation assertion + valid_for_go_gp2term @@ -429,6 +464,7 @@ Where we have an annotation assertion + IUPAC NAME @@ -437,6 +473,7 @@ Where we have an annotation assertion + Preliminary entries @@ -445,6 +482,7 @@ Where we have an annotation assertion + Annotated by 3rd party @@ -453,6 +491,7 @@ Where we have an annotation assertion + Manually annotated by ChEBI Team @@ -496,7 +535,9 @@ Where we have an annotation assertion - + + smile + @@ -517,25 +558,32 @@ Where we have an annotation assertion An entity responsible for making contributions to the content of the resource. + Contributor - + + creator + - + + date + - + + description + @@ -606,6 +654,12 @@ Where we have an annotation assertion + + + + + + @@ -734,7 +788,9 @@ Where we have an annotation assertion - + + date + @@ -748,7 +804,9 @@ Where we have an annotation assertion - + + database cross reference + @@ -784,7 +842,10 @@ Where we have an annotation assertion - + + An identifier for an individual entity + id + @@ -798,7 +859,9 @@ Where we have an annotation assertion - + + obo-source + @@ -810,19 +873,49 @@ Where we have an annotation assertion - + + comment + + + + + + + + is defined by + - + + label + + + + + + + + see also + + + + + + + + versionInfo + - + + has close match + @@ -1474,12 +1567,6 @@ Some currently missing phenomena that should be considered "about" are Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. directly regulated by - - - - Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. - GOC:dos - @@ -1488,18 +1575,12 @@ Some currently missing phenomena that should be considered "about" are - Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. + Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. dos 2017-09-17T13:52:38Z directly negatively regulated by - - - - Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. - GOC:dos - - + @@ -1512,13 +1593,7 @@ Some currently missing phenomena that should be considered "about" are 2017-09-17T13:52:47Z directly positively regulated by - - - - Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. - GOC:dos - - + @@ -1532,12 +1607,7 @@ Some currently missing phenomena that should be considered "about" are This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations. has effector activity - - - - A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. - GOC:dos - + @@ -1612,15 +1682,6 @@ Some currently missing phenomena that should be considered "about" are overlaps - - - - - - - - true - @@ -1746,16 +1807,7 @@ Some currently missing phenomena that should be considered "about" are capable of part of - - - - - - - - true - - + @@ -2770,7 +2822,7 @@ For example, A and B may be gene products and binding of B by A positively regul dataset creation dataset creating - + @@ -2791,31 +2843,7 @@ For example, A and B may be gene products and binding of B by A positively regul disposition - - - - b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002]) - - - - - - If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002]) - - - - - - (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] - - - - - - (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] - - - + @@ -2837,19 +2865,7 @@ For example, A and B may be gene products and binding of B by A positively regul role - - - - b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001]) - - - - - - (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] - - - + @@ -2867,19 +2883,7 @@ For example, A and B may be gene products and binding of B by A positively regul function - - - - A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001]) - - - - - - (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] - - - + @@ -2887,7 +2891,6 @@ For example, A and B may be gene products and binding of B by A positively regul - Any form of carbon black which has a particle size of less than 100 nm in each dimension. PMCID:PMC3190904 PMID:21525001 @@ -2911,109 +2914,7 @@ For example, A and B may be gene products and binding of B by A positively regul carbon black nanoparticle - - - - PMCID:PMC3190904 - Europe PMC - - - - - PMID:21525001 - Europe PMC - - - - - PMID:22753103 - Europe PMC - - - - - PMID:24078381 - Europe PMC - - - - - PMID:24283474 - Europe PMC - - - - - PMID:25056782 - Europe PMC - - - - - PMID:25071917 - Europe PMC - - - - - PMID:25184212 - Europe PMC - - - - - PMID:25451823 - Europe PMC - - - - - PMID:25833640 - Europe PMC - - - - - PMID:25966413 - Europe PMC - - - - - PMID:26066782 - Europe PMC - - - - - PMID:26551751 - Europe PMC - - - - - PMID:26914170 - Europe PMC - - - - - PMID:27460290 - Europe PMC - - - - - PMID:27534448 - Europe PMC - - - - - carbon black nanoparticles - ChEBI - - + @@ -3057,123 +2958,7 @@ For example, A and B may be gene products and binding of B by A positively regul cyanide - - - - Beilstein:1900509 - Beilstein - - - - - CAS:57-12-5 - ChemIDplus - - - - - CAS:57-12-5 - KEGG COMPOUND - - - - - CAS:57-12-5 - NIST Chemistry WebBook - - - - - Gmelin:89 - Gmelin - - - - - PMID:11386635 - Europe PMC - - - - - PMID:14871577 - Europe PMC - - - - - PMID:17554165 - Europe PMC - - - - - PMID:7839575 - Europe PMC - - - - - Reaxys:1900509 - Reaxys - - - - - Cyanide - ChEBI - - - - - Cyanide - KEGG_COMPOUND - - - - - cyanide - IUPAC - - - - - - nitridocarbonate(1-) - IUPAC - - - - - - CN(-) - IUPAC - - - - - CN- - KEGG_COMPOUND - - - - - CYANIDE ION - PDBeChem - - - - - Prussiate - KEGG_COMPOUND - - - - - Zyanid - ChEBI - - + @@ -3191,51 +2976,14 @@ For example, A and B may be gene products and binding of B by A positively regul anion - - - - Anion - ChEBI - - - - - anion - ChEBI - - - - - anion - IUPAC - - - - - - Anionen - ChEBI - - - - - aniones - ChEBI - - - - - anions - IUPAC - - + - Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. + Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. molecular entity chebi_ontology entidad molecular @@ -3247,64 +2995,24 @@ For example, A and B may be gene products and binding of B by A positively regul molecular entity - - - - molecular entity - IUPAC - - - - - - entidad molecular - IUPAC - - - - - entidades moleculares - IUPAC - - - - - entite moleculaire - IUPAC - - - - - molecular entities - IUPAC - - - - - molekulare Entitaet - ChEBI - - + A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances. + + chemical entity chebi_ontology CHEBI:24431 + chemical entity chemische Entität - - - - chemical entity - UniProt - - + @@ -3321,19 +3029,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic heterocyclic compound - - - - organic heterocycle - ChEBI - - - - - organic heterocyclic compounds - ChEBI - - + @@ -3351,44 +3047,7 @@ For example, A and B may be gene products and binding of B by A positively regul ion - - - - Ion - ChEBI - - - - - ion - ChEBI - - - - - ion - IUPAC - - - - - - Ionen - ChEBI - - - - - iones - ChEBI - - - - - ions - ChEBI - - + @@ -3406,37 +3065,7 @@ For example, A and B may be gene products and binding of B by A positively regul molecule - - - - molecule - IUPAC - - - - - Molekuel - ChEBI - - - - - molecula - IUPAC - - - - - molecules - IUPAC - - - - - neutral molecular compounds - IUPAC - - + @@ -3444,20 +3073,14 @@ For example, A and B may be gene products and binding of B by A positively regul - Any organic ion with a net negative charge. + Any organic ion with a net negative charge. chebi_ontology organic anions CHEBI:25696 organic anion - - - - organic anions - ChEBI - - + @@ -3471,13 +3094,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic ion - - - - organic ions - ChEBI - - + @@ -3491,19 +3108,7 @@ For example, A and B may be gene products and binding of B by A positively regul sulfur molecular entity - - - - sulfur molecular entity - ChEBI - - - - - sulfur molecular entities - ChEBI - - + @@ -3527,25 +3132,7 @@ For example, A and B may be gene products and binding of B by A positively regul rubber particle [chebi] - - - - Rubber particle - KEGG_COMPOUND - - - - - Rubber - KEGG_COMPOUND - - - - - Rubber (all-cis) - KEGG_COMPOUND - - + @@ -3561,25 +3148,7 @@ For example, A and B may be gene products and binding of B by A positively regul elemental molecular entity - - - - homoatomic entity - ChEBI - - - - - homoatomic molecular entities - ChEBI - - - - - homoatomic molecular entity - ChEBI - - + @@ -3598,19 +3167,7 @@ For example, A and B may be gene products and binding of B by A positively regul organosulfur compound - - - - organosulfur compound - ChEBI - - - - - organosulfur compounds - ChEBI - - + @@ -3625,13 +3182,7 @@ For example, A and B may be gene products and binding of B by A positively regul polyatomic anion - - - - polyatomic anions - ChEBI - - + @@ -3646,19 +3197,7 @@ For example, A and B may be gene products and binding of B by A positively regul heteroorganic entity - - - - heteroorganic entities - ChEBI - - - - - organoelement compounds - ChEBI - - + @@ -3673,19 +3212,7 @@ For example, A and B may be gene products and binding of B by A positively regul pnictogen molecular entity - - - - pnictogen molecular entity - ChEBI - - - - - pnictogen molecular entities - ChEBI - - + @@ -3701,25 +3228,7 @@ For example, A and B may be gene products and binding of B by A positively regul chalcogen molecular entity - - - - chalcogen molecular entity - ChEBI - - - - - chalcogen compounds - ChEBI - - - - - chalcogen molecular entities - ChEBI - - + @@ -3736,87 +3245,7 @@ For example, A and B may be gene products and binding of B by A positively regul elemental carbon - - - - CAS:7440-44-0 - ChemIDplus - - - - - CAS:7440-44-0 - NIST Chemistry WebBook - - - - - CAS:82600-58-6 - NIST Chemistry WebBook - - - - - Gmelin:8868 - Gmelin - - - - - carbon - ChemIDplus - - - - - - - - - A bivalent group formed by removing two hydrogen atoms from a hydrocarbon, the free valencies of which are not engaged in a double bond. - hydrocarbylene group - hydrocarbylene groups - chebi_ontology - groupe hydrocarbylene - grupo hidrocarbileno - grupos hidrocarbileno - CHEBI:33471 - - hydrocarbylene group - - - - - hydrocarbylene group - IUPAC - - - - - - hydrocarbylene groups - IUPAC - - - - - - groupe hydrocarbylene - IUPAC - - - - - grupo hidrocarbileno - IUPAC - - - - - grupos hidrocarbileno - IUPAC - - + @@ -3831,19 +3260,7 @@ For example, A and B may be gene products and binding of B by A positively regul main group molecular entity - - - - main group compounds - ChEBI - - - - - main group molecular entities - ChEBI - - + @@ -3857,19 +3274,7 @@ For example, A and B may be gene products and binding of B by A positively regul carbon group molecular entity - - - - carbon group molecular entity - ChEBI - - - - - carbon group molecular entities - ChEBI - - + @@ -3884,13 +3289,7 @@ For example, A and B may be gene products and binding of B by A positively regul cyclic compound - - - - cyclic compounds - ChEBI - - + @@ -3907,33 +3306,7 @@ For example, A and B may be gene products and binding of B by A positively regul aromatic compound - - - - aromatic compounds - IUPAC - - - - - - aromatic molecular entity - IUPAC - - - - - - aromatics - ChEBI - - - - - aromatische Verbindungen - ChEBI - - + @@ -3947,13 +3320,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic aromatic compound - - - - organic aromatic compounds - ChEBI - - + @@ -3969,25 +3336,7 @@ For example, A and B may be gene products and binding of B by A positively regul p-block molecular entity - - - - p-block compounds - ChEBI - - - - - p-block molecular entities - ChEBI - - - - - p-block molecular entitiy - ChEBI - - + @@ -4002,13 +3351,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic cyclic compound - - - - organic cyclic compounds - ChEBI - - + @@ -4024,20 +3367,7 @@ For example, A and B may be gene products and binding of B by A positively regul heteroarene - - - - heteroarenes - IUPAC - - - - - - hetarenes - IUPAC - - + @@ -4053,20 +3383,7 @@ For example, A and B may be gene products and binding of B by A positively regul organonitrogen compound - - - - organonitrogen compounds - IUPAC - - - - - - organonitrogens - ChEBI - - + @@ -4088,26 +3405,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic disulfide - - - - disulfides - IUPAC - - - - - - an organic disulfide - UniProt - - - - - organic disulfides - ChEBI - - + @@ -4121,13 +3419,7 @@ For example, A and B may be gene products and binding of B by A positively regul polyatomic entity - - - - polyatomic entities - ChEBI - - + @@ -4142,13 +3434,7 @@ For example, A and B may be gene products and binding of B by A positively regul polyatomic ion - - - - polyatomic ions - ChEBI - - + @@ -4165,38 +3451,7 @@ For example, A and B may be gene products and binding of B by A positively regul pseudohalide anion - - - - pseudohalide ions - IUPAC - - - - - - pseudohalide anions - ChEBI - - - - - pseudohalides - ChEBI - - - - - pseudohalogen anion - ChEBI - - - - - pseudohalogen ion - ChEBI - - + @@ -4210,13 +3465,7 @@ For example, A and B may be gene products and binding of B by A positively regul polyatomic monoanion - - - - polyatomic monoanions - ChEBI - - + @@ -4230,13 +3479,7 @@ For example, A and B may be gene products and binding of B by A positively regul monoanion - - - - monoanions - ChEBI - - + @@ -4252,19 +3495,7 @@ For example, A and B may be gene products and binding of B by A positively regul organochalcogen compound - - - - organochalcogen compound - ChEBI - - - - - organochalcogen compounds - ChEBI - - + @@ -4280,19 +3511,7 @@ For example, A and B may be gene products and binding of B by A positively regul organonitrogen heterocyclic compound - - - - heterocyclic organonitrogen compounds - ChEBI - - - - - organonitrogen heterocyclic compounds - ChEBI - - + @@ -4307,19 +3526,7 @@ For example, A and B may be gene products and binding of B by A positively regul organosulfur heterocyclic compound - - - - heterocyclic organosulfur compounds - ChEBI - - - - - organosulfur heterocyclic compounds - ChEBI - - + @@ -4332,13 +3539,7 @@ For example, A and B may be gene products and binding of B by A positively regul monocyclic heteroarene - - - - monocyclic heteroarenes - ChEBI - - + @@ -4353,13 +3554,7 @@ For example, A and B may be gene products and binding of B by A positively regul 1,3-thiazoles - - - - 1,3-thiazoles - ChEBI - - + @@ -4373,13 +3568,7 @@ For example, A and B may be gene products and binding of B by A positively regul disulfide - - - - disulfides - ChEBI - - + @@ -4392,15 +3581,9 @@ For example, A and B may be gene products and binding of B by A positively regul thiazole CHEBI:48901 - thiazoles + thiazoles [chebi] - - - - thiazole - ChEBI - - + @@ -4414,13 +3597,7 @@ For example, A and B may be gene products and binding of B by A positively regul nanostructure - - - - nanoestructura - ChEBI - - + @@ -4438,37 +3615,7 @@ For example, A and B may be gene products and binding of B by A positively regul nanoparticle - - - - NP - ChEBI - - - - - Nanoteilchen - ChEBI - - - - - nanoparticles - ChEBI - - - - - nanoparticula - ChEBI - - - - - nanoparticule - ChEBI - - + @@ -4482,13 +3629,7 @@ For example, A and B may be gene products and binding of B by A positively regul carbon nanostructure - - - - carbon nanostructures - ChEBI - - + @@ -4506,25 +3647,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic molecular entity - - - - organic compounds - ChEBI - - - - - organic entity - ChEBI - - - - - organic molecular entities - ChEBI - - + @@ -4542,55 +3665,19 @@ For example, A and B may be gene products and binding of B by A positively regul nitrogen molecular entity - - - - Nitrogenous compounds - KEGG_COMPOUND - - - - - nitrogen compounds - ChEBI - - - - - nitrogen molecular entities - ChEBI - - - - - - - - - Any organic substituent group, regardless of functional type, having two free valences at carbon atom(s). - chebi_ontology - organodiyl groups - CHEBI:51422 - - organodiyl group - - - - - organodiyl groups - ChEBI - - + - chebi_ontology + Lars Vogt + English + 23.10.2023 CHEBI:51446 - - organic divalent group + CHEBI + organic divalent group [chebi] @@ -4610,37 +3697,7 @@ For example, A and B may be gene products and binding of B by A positively regul heterocyclic compound - - - - Heterocyclic compound - KEGG_COMPOUND - - - - - compuesto heterociclico - IUPAC - - - - - compuestos heterociclicos - IUPAC - - - - - heterocycle - ChEBI - - - - - heterocyclic compounds - ChEBI - - + @@ -4656,13 +3713,7 @@ For example, A and B may be gene products and binding of B by A positively regul chemical substance chemische Substanz - - - - Chemische Substanz - ChEBI - - + @@ -4678,13 +3729,7 @@ For example, A and B may be gene products and binding of B by A positively regul Mischung mixture - - - - Mischung - ChEBI - - + @@ -4700,13 +3745,7 @@ For example, A and B may be gene products and binding of B by A positively regul azole - - - - azoles - ChEBI - - + @@ -4723,112 +3762,7 @@ For example, A and B may be gene products and binding of B by A positively regul organic molecule - - - - organic compound - ChEBI - - - - - organic compounds - ChEBI - - - - - organic molecules - ChEBI - - - - - - - - - An elemental carbon in the form of virtually pure colloidal particles that are produced by incomplete combustion or thermal decomposition of gaseous or liquid hydrocarbons under controlled conditions. A black, finely divided pellet or powder, its properties of specific surface area, particle size and structure, conductivity and colour can be varied by varying the exact conditions for its production. It is used in tyres, rubber and plastic products, printing inks and coatings. - CAS:1333-86-4 - KEGG:C19202 - PMID:24291665 - PMID:24669321 - PMID:25071917 - PMID:26803751 - Wikipedia:Carbon_black - chebi_ontology - CHEBI:82297 - - carbon black - - - - - CAS:1333-86-4 - ChemIDplus - - - - - CAS:1333-86-4 - KEGG COMPOUND - - - - - PMID:24291665 - Europe PMC - - - - - PMID:24669321 - Europe PMC - - - - - PMID:25071917 - Europe PMC - - - - - PMID:26803751 - Europe PMC - - - - - - - - - 0 - C12H16O15S2 - CAS:53973-98-1 - KEGG:C19203 - KEGG:D05539 - chebi_ontology - Carrageenan, degraded - Carrageenan, degraded - CHEBI:82298 - - Poligeenan - - - - - CAS:53973-98-1 - KEGG COMPOUND - - - - - Carrageenan, degraded - KEGG_COMPOUND - - + @@ -4836,20 +3770,14 @@ For example, A and B may be gene products and binding of B by A positively regul - An organic anion in which the charge resides on a sulfur atom. + An organic anion in which the charge resides on a sulfur atom. chebi_ontology organic sulfur anions CHEBI:84291 organic sulfur anion - - - - organic sulfur anions - ChEBI - - + @@ -4874,44 +3802,13 @@ For example, A and B may be gene products and binding of B by A positively regul A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process. + A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process. molecular function GO:0003674 Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex. molecular_function - - - - A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process. - GOC:pdt - - - - - - - A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. - A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. - jl - 2012-09-19T15:05:24Z - Wikipedia:Biological_process - biological process - physiological process - single organism process - single-organism process - GO:0008150 - Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. - biological process - biologischer Prozess - - - - - A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. - GOC:pdt - - @@ -4919,6 +3816,7 @@ For example, A and B may be gene products and binding of B by A positively regul Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. + Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. Reactome:R-HSA-6788855 Reactome:R-HSA-6788867 phosphokinase activity @@ -4926,25 +3824,7 @@ For example, A and B may be gene products and binding of B by A positively regul Note that this term encompasses all activities that transfer a single phosphate group; although ATP is by far the most common phosphate donor, reactions using other phosphate donors are included in this term. kinase activity - - - - Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. - ISBN:0198506732 - - - - - Reactome:R-HSA-6788855 - FN3KRP phosphorylates PsiAm, RibAm - - - - - Reactome:R-HSA-6788867 - FN3K phosphorylates ketosamines - - + @@ -5089,6 +3969,8 @@ JAR: A data item is an approximately justified approximately true approximate be PlanAndPlannedProcess Branch OBI_0000270 adapted from discussion on OBI list (Matthew Pocock, Christian Cocos, Alan Ruttenberg) + IAO:0000064 + algorithm @@ -5812,7 +4694,7 @@ for now. manufacturer role With respect to The Accuri C6 Flow Cytometer System, the organization Accuri bears the role manufacturer role. With respect to a transformed line of tissue culture cells derived by a specific lab, the lab whose personnel isolated the cll line bears the role manufacturer role. With respect to a specific antibody produced by an individual scientist, the scientist who purifies, characterizes and distributes the anitbody bears the role manufacturer role. - Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process. + Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process. GROUP: Role Branch OBI manufacturer role @@ -5862,7 +4744,7 @@ for now. specimen collection process drawing blood from a patient for analysis, collecting a piece of a plant for depositing in a herbarium, buying meat from a butcher in order to measure its protein content in an investigation - A planned process with the objective of collecting a specimen. + A planned process with the objective of collecting a specimen. Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation. Philly2013: A specimen collection can have as part a material entity acquisition, such as ordering from a bank. The distinction is that specimen collection necessarily involves the creation of a specimen role. However ordering cell lines cells from ATCC for use in an investigation is NOT a specimen collection, because the cell lines already have a specimen role. Philly2013: The specimen_role for the specimen is created during the specimen collection process. @@ -5928,7 +4810,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ GenePattern software - a software that provides access to more than 100 tools for gene expression analysis, proteomics, SNP analysis and common data processing tasks. + a software that provides access to more than 100 tools for gene expression analysis, proteomics, SNP analysis and common data processing tasks. James Malone Person:Helen Parkinson WEB: http://www.broadinstitute.org/cancer/software/genepattern/ @@ -6023,7 +4905,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ measurement device A ruler, a microarray scanner, a Geiger counter. - A device in which a measure function inheres. + A device in which a measure function inheres. GROUP:OBI Philly workshop OBI measurement device @@ -6042,7 +4924,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ manufacturer - A person or organization that has a manufacturer role + A person or organization that has a manufacturer role manufacturer @@ -6054,7 +4936,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ sterilization function - a function to remove viable organisms from an input material + a function to remove viable organisms from an input material sterilization function @@ -6073,7 +4955,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ service provider role Jackson Lab provides experimental animals, EBI provides training on databases, a core facility provides access to a DNA sequencer. - is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person + is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person PERSON:Helen Parkinson service provider role @@ -6097,7 +4979,7 @@ http://sourceforge.net/p/obi/obi-terms/716/ A tissue sample that has been sliced and stained for a histology study. A blood specimen that has been centrifuged to obtain the white blood cells. - A specimen that has been intentionally physically modified. + A specimen that has been intentionally physically modified. Bjoern Peters Bjoern Peters A tissue sample that has been sliced and stained for a histology study. @@ -6113,7 +4995,7 @@ A blood specimen that has been centrifuged to obtain the white blood cells.categorical label The labels 'positive' vs. 'negative', or 'left handed', 'right handed', 'ambidexterous', or 'strongly binding', 'weakly binding' , 'not binding', or '+++', '++', '+', '-' etc. form scales of categorical labels. - A label that is part of a categorical datum and that indicates the value of the data item on the categorical scale. + A label that is part of a categorical datum and that indicates the value of the data item on the categorical scale. Bjoern Peters Bjoern Peters categorical label @@ -6135,7 +5017,7 @@ A blood specimen that has been centrifuged to obtain the white blood cells.A voltmeter is a measurement device which is intended to perform some measure function. An autoclave is a device that sterlizes instruments or contaminated waste by applying high temperature and pressure. - A material entity that is designed to perform a function in a scientific investigation, but is not a reagent. + A material entity that is designed to perform a function in a scientific investigation, but is not a reagent. 2012-12-17 JAO: In common lab usage, there is a distinction made between devices and reagents that is difficult to model. Therefore we have chosen to specifically exclude reagents from the definition of "device", and are enumerating the types of roles that a reagent can perform. 2013-6-5 MHB: The following clarifications are outcomes of the May 2013 Philly Workshop. Reagents are distinguished from devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in some chemical interaction or reaction during the realization of their experimental role. By contrast, devices do not participate in such chemical reactions/interactions. Note that there are cases where devices use reagent components during their operation, where the reagent-device distinction is less clear. For example: @@ -6212,7 +5094,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S environmental control device A growth chamber is an environmental control device. - An environmental control device is a device which has the function to control some aspect of the environment such as temperature, or humidity. + An environmental control device is a device which has the function to control some aspect of the environment such as temperature, or humidity. Helen Parkinson OBI environmental control device @@ -6244,7 +5126,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S autoclave - A device that is used to sterilize equipment and supplies by subjecting them to high pressure steam at 121 C or more, typically for 15 to 20 minutes depending on the size of the load and the contents. + A device that is used to sterilize equipment and supplies by subjecting them to high pressure steam at 121 C or more, typically for 15 to 20 minutes depending on the size of the load and the contents. PERSON: Erik Segerdell J. Black, Microbiology, Prentice Hall (1993) pg. 334; http://en.wikipedia.org/wiki/Autoclave autoclave @@ -6258,7 +5140,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S categorical value specification - A value specification that is specifies one category out of a fixed number of nominal categories + A value specification that is specifies one category out of a fixed number of nominal categories PERSON:Bjoern Peters categorical value specification @@ -6271,7 +5153,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S value specification The value of 'positive' in a classification scheme of "positive or negative"; the value of '20g' on the quantitative scale of mass. - An information content entity that specifies a value within a classification scheme or on a quantitative scale. + An information content entity that specifies a value within a classification scheme or on a quantitative scale. This term is currently a descendant of 'information content entity', which requires that it 'is about' something. A value specification of '20g' for a measurement data item of the mass of a particular mouse 'is about' the mass of that mouse. However there are cases where a value specification is not clearly about any particular. In the future we may change 'value specification' to remove the 'is about' requirement. PERSON:Bjoern Peters value specification @@ -6288,8 +5170,8 @@ JZ: based on textual definition of edited document, it can be defined as N&S A material entity that has two or more specimens as its parts. Details see tracker: https://sourceforge.net/p/obi/obi-terms/778/ Person: Chris Stoeckert, Jie Zheng - OBIB, OBI Biobank + collection of specimens @@ -6303,7 +5185,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S G1:Well differentiated G4: Undifferentiated - A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the American Joint Committee on Cancer (AJCC) 7th Edition grading system. + A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the American Joint Committee on Cancer (AJCC) 7th Edition grading system. Chris Stoeckert, Helena Ellis NCI BBRB, OBI NCI BBRB @@ -6318,7 +5200,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S histologic grade according to the Fuhrman Nuclear Grading System - A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the Fuhrman Nuclear Grading System. + A categorical value specification that is a histologic grade assigned to a tumor slide specimen according to the Fuhrman Nuclear Grading System. Chris Stoeckert, Helena Ellis Histologic Grade (Fuhrman Nuclear Grading System) NCI BBRB, OBI @@ -6334,7 +5216,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S histologic grade for ovarian tumor - A categorical value specification that is a histologic grade assigned to a ovarian tumor. + A categorical value specification that is a histologic grade assigned to a ovarian tumor. Chris Stoeckert, Helena Ellis NCI BBRB, OBI NCI BBRB @@ -6349,7 +5231,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S histologic grade for ovarian tumor according to a two-tier grading system - A histologic grade for ovarian tumor that is from a two-tier histological classification of tumors. + A histologic grade for ovarian tumor that is from a two-tier histological classification of tumors. Chris Stoeckert, Helena Ellis NCI BBRB, OBI NCI BBRB @@ -6364,7 +5246,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S histologic grade for ovarian tumor according to the World Health Organization - A histologic grade for ovarian tumor that is from a histological classification by the World Health Organization (WHO). + A histologic grade for ovarian tumor that is from a histological classification by the World Health Organization (WHO). Chris Stoeckert, Helena Ellis NCI BBRB, OBI NCI BBRB @@ -6507,7 +5389,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S pathologic distant metastases stage for colon according to AJCC 7th edition - A categorical value specification that is a pathologic finding about one or more characteristics of colon cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery. + A categorical value specification that is a pathologic finding about one or more characteristics of colon cancer following the rules of the TNM AJCC v7 classification system as they pertain to distant metastases. TNM pathologic distant metastasis findings are based on clinical findings supplemented by histopathologic examination of one or more tissue specimens acquired during surgery. Chris Stoeckert, Helena Ellis M: colon distant metastases (AJCC 7th Edition) NCI BBRB, OBI @@ -6571,7 +5453,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S clinical tumor stage group according to AJCC 7th edition - A categorical value specification that is an assessment of the stage of a cancer according to the American Joint Committee on Cancer (AJCC) v7 staging systems. + A categorical value specification that is an assessment of the stage of a cancer according to the American Joint Committee on Cancer (AJCC) v7 staging systems. Chris Stoeckert, Helena Ellis Clinical tumor stage group (AJCC 7th Edition) NCI BBRB, OBI @@ -6587,7 +5469,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S International Federation of Gynecology and Obstetrics cervical cancer stage value specification - A categorical value specification that is an assessment of the stage of a gynecologic cancer according to the International Federation of Gynecology and Obstetrics (FIGO) staging systems. + A categorical value specification that is an assessment of the stage of a gynecologic cancer according to the International Federation of Gynecology and Obstetrics (FIGO) staging systems. Chris Stoeckert, Helena Ellis Clinical FIGO stage NCI BBRB, OBI @@ -6603,7 +5485,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S International Federation of Gynecology and Obstetrics ovarian cancer stage value specification - A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the FIGO classification system. + A categorical value specification that is a pathologic finding about one or more characteristics of ovarian cancer following the rules of the FIGO classification system. Chris Stoeckert, Helena Ellis Pathologic Tumor Stage Grouping for ovarian cancer (FIGO) NCI BBRB, OBI @@ -6619,7 +5501,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S performance status value specification - A categorical value specification that is an assessment of a participant's performance status (general well-being and activities of daily life). + A categorical value specification that is an assessment of a participant's performance status (general well-being and activities of daily life). Chris Stoeckert, Helena Ellis Performance Status Scale https://en.wikipedia.org/wiki/Performance_status @@ -6635,7 +5517,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S Eastern Cooperative Oncology Group score value specification - A performance status value specification designed by the Eastern Cooperative Oncology Group to assess disease progression and its affect on the daily living abilities of the patient. + A performance status value specification designed by the Eastern Cooperative Oncology Group to assess disease progression and its affect on the daily living abilities of the patient. Chris Stoeckert, Helena Ellis ECOG score NCI BBRB, OBI @@ -6651,7 +5533,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S Karnofsky score vaue specification - A performance status value specification designed for classifying patients 16 years of age or older by their functional impairment. + A performance status value specification designed for classifying patients 16 years of age or older by their functional impairment. Chris Stoeckert, Helena Ellis Karnofsky Score NCI BBRB, OBI @@ -6672,7 +5554,7 @@ JZ: based on textual definition of edited document, it can be defined as N&S material supplier - A person or organization that provides material supplies to other people or organizations. + A person or organization that provides material supplies to other people or organizations. Rebecca Jackson https://github.com/obi-ontology/obi/issues/1289 material supplier @@ -6958,7 +5840,7 @@ information_encoding concentration of - A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. + A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. concentration of @@ -6970,7 +5852,7 @@ information_encoding morphology - A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. + A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. morphology @@ -6982,7 +5864,7 @@ information_encoding length - A 1-D extent quality which is equal to the distance between two points. + A 1-D extent quality which is equal to the distance between two points. length @@ -6994,7 +5876,7 @@ information_encoding temperature - A physical quality of the thermal energy of a system. + A physical quality of the thermal energy of a system. temperature @@ -7006,7 +5888,7 @@ information_encoding physical quality - A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. + A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. physical quality @@ -7018,7 +5900,7 @@ information_encoding pressure - A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts. + A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts. pressure @@ -7029,8 +5911,9 @@ information_encoding physical object quality - A quality which inheres in a continuant. + A quality which inheres in a continuant. + physical object quality @@ -7041,7 +5924,7 @@ information_encoding electromagnetic (EM) radiation quality - A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation. + A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation. electromagnetic (EM) radiation quality @@ -7053,7 +5936,7 @@ information_encoding optical quality - An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. + An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. optical quality @@ -7065,7 +5948,7 @@ information_encoding quality of a solid - A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. + A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. quality of a solid @@ -7077,7 +5960,7 @@ information_encoding quality of a liquid - A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape. + A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape. quality of a liquid @@ -7089,7 +5972,7 @@ information_encoding radiation quality - A quality that inheres in an bearer by virtue of how that bearer interacts with radiation. + A quality that inheres in an bearer by virtue of how that bearer interacts with radiation. radiation quality @@ -7101,7 +5984,7 @@ information_encoding molecular quality - A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. + A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. molecular quality @@ -7113,7 +5996,7 @@ information_encoding quality of a substance - A quality inhering in a bearer by virtue of its constitution. + A quality inhering in a bearer by virtue of its constitution. quality of a substance @@ -7287,7 +6170,7 @@ extrusion process English 18.08.2022 - geosparql + geometry [geosparql] quality @@ -7342,7 +6225,7 @@ between to points 18.08.2022 mm Imported from ontocomons, also present in TIB terminological service - NIST (OntoCommons) + millimeter [nist] millimeter [nist] quality @@ -7676,12 +6559,13 @@ members of a group differ from the mean Methods for grouping objects into subsets such that those within each cluster are more closely related to one another than objects assigned to different clusters. http://purl.obolibrary.org/obo/NCIT_C15426 + AKHILESH VYAS Luis Ramos English 22.08.2022 22.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + cluster analysis [ncti] plan specification @@ -7714,7 +6598,7 @@ members of a group differ from the mean 22.08.2022 22.08.2022 http://edamontology.org - EDAM + data mining [edam] plan specification @@ -7747,7 +6631,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + database [ncti] material entity @@ -7779,7 +6663,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + deep learning [ncti] plan specification @@ -7850,7 +6734,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/rex.owl - REX + extrusion [rex] process @@ -7869,7 +6753,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/chmo.owl - CHMO + extrusion [chmo] process @@ -7940,7 +6824,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + Artificial Intelligence (AI) [ncti] plan specification @@ -7972,7 +6856,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + machine learning [ncti] plan specification @@ -7991,7 +6875,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/obi.owl - OBI + machine learning [obi] plan specification @@ -8004,13 +6888,13 @@ members of a group differ from the mean uncurated A topic concerning the application of artificial intelligence methods to algorithms, in order to create methods that can learn from data in order to generate an ouput, rather than relying on explicitly encoded information only. http://edamontology.org/topic_3474 - + Luis Ramos English 23.08.2022 23.08.2022 http://edamontology.org - EDAM + machine learning [edam] plan specification @@ -8055,7 +6939,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/chmo.owl - CHMO + mixing [chmo] process @@ -8074,7 +6958,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + mixing [ncti] process @@ -8106,7 +6990,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + pattern recognition [ncti] plan specification @@ -8138,7 +7022,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + neural network [ncti] plan specification @@ -8196,7 +7080,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + optimization [ncti] process @@ -8294,7 +7178,7 @@ members of a group differ from the mean 23.08.2022 23.08.2022 http://purl.obolibrary.org/obo/obi.owl - OBI + supervised learning [obi] plan specification @@ -8716,7 +7600,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCTI + factor [ncti] faktor [ncti] information content entity @@ -8735,7 +7619,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - PROCO + factor [proco] faktor [proco] information content entity @@ -8748,12 +7632,12 @@ members of a group differ from the mean uncurated A multiplicand in a mathematical product expression. [Allotrope] - http://purl.allotrope.org/ontologies/result#AFR_0000924> + English 15.08.2022 skos:definition - allotrope + factor [allotrope] faktor [allotrope] information content entity @@ -8784,7 +7668,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCTI + cost [ncti] kosten [ncti] information content entity @@ -8947,7 +7831,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCIT + condition [ncti] zustand [ncti] quality @@ -8966,7 +7850,7 @@ members of a group differ from the mean English 22.08.2023 22.08.2023 - shacl + condition [shacl] zustand [shacl] quality @@ -8985,7 +7869,7 @@ members of a group differ from the mean English 22.08.2024 22.08.2024 - ssn + condition [ssn] zustand [ssn] quality @@ -9242,7 +8126,7 @@ members of a group differ from the mean English 15.08.2022 rdfs:comment - iiRDS + maintenance interval [iirds] wartungsintevall information content entity @@ -9330,8 +8214,9 @@ members of a group differ from the mean uncurated - A particle in the physical sciences is a small localized object to which can be ascribed physical properties. [Wikipedia] - + A particle in the physical sciences is a small localized object to which can be ascribed physical properties. + + Lars M Vogt English @@ -9356,7 +8241,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCIT + Gebäude building material entity @@ -9364,6 +8249,14 @@ members of a group differ from the mean + + + + deprecated class + + + + @@ -9411,7 +8304,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCTI + direct cost direkte kosten information content entity @@ -9752,7 +8645,7 @@ members of a group differ from the mean English 22.08.2022 22.08.2022 - NCIT + narural rubber [ncti] naturkautschuk [ncti] material entity @@ -10064,10 +8957,12 @@ members of a group differ from the mean The degree to which two or more quantities or events are associated, a statistical relation between two or more variables such that systematic changes in the value of one variable are accompanied by systematic changes in the others. The collelation can be described by mathematical functions (often a linear function is used). It’s a common tool for describing simple relationships without making a statement about cause and effect. https://www.jmp.com/en_ca/statistics-knowledge-portal/what-is-correlation.html; http://purl.obolibrary.org/obo/NCIT_C48834 + Yamen Alsalka (IFNANO) 06.06.2023 31.03.2022 Correlations are useful for describing simple relationships among data + Correlation [ifnano] information content entity @@ -10121,7 +9016,7 @@ members of a group differ from the mean English 17.08.2022 https://www.materials.fraunhofer.de/ontologies/BWMD_ontology - BWMD + concentration [bwmd] quality @@ -10138,7 +9033,7 @@ members of a group differ from the mean English 17.08.2022 http://purl.allotrope.org/ontologies/ - allotrope.org + concentration [allotrope] quality @@ -10169,10 +9064,11 @@ members of a group differ from the mean The concentration of a chemical compound. http://edamontology.org/data_2140 + English 19.08.2022 http://edamontology.org - EDAM + concentration [edam] quality @@ -10188,8 +9084,9 @@ members of a group differ from the mean English 19.08.2022 + CHMO:0002820 http://purl.obolibrary.org/obo/chmo.owl - CHMO + concentration [chmo] quality @@ -10206,7 +9103,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.dataone.org/odo/ECSO8.owl - ECSO + concentration [ecso] quality @@ -10254,7 +9151,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/rex.owl - REX + extrusion [rex] process @@ -10305,7 +9202,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/chmo.owl - CHMO + Laser induced breakdown spectroscopy [chmo] plan specification @@ -10352,7 +9249,7 @@ members of a group differ from the mean English 17.08.2022 http://purl.allotrope.org/ontologies/ - allotrope.org + peak [allotrope] information content entity @@ -10369,7 +9266,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + peak [ncit] information content entity @@ -10399,7 +9296,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ms.owl - MS + peak [ms] information content entity @@ -10517,7 +9414,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + Metadata [ncit] information content entity @@ -10548,7 +9445,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + Photometry [ncit] plan specification @@ -10577,7 +9474,7 @@ members of a group differ from the mean English 17.08.2022 http://purl.allotrope.org/ontologies/ - allotrope.org + Colorimetry [allotrope] plan specification @@ -10591,10 +9488,11 @@ members of a group differ from the mean An assessment used to quantify and describe the colors within the visible spectrum of light. http://purl.obolibrary.org/obo/NCIT_C111096 + English 19.08.2022 http://purl.allotrope.org/ontologies/ - NCTI + Colorimetry [ncit] plan specification @@ -10653,7 +9551,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + Pixel [ncit] information content entity @@ -10692,7 +9590,7 @@ members of a group differ from the mean English 18.08.2022 allotrope - allotrope.org + Image analysis [allotrope] plan specification @@ -10705,11 +9603,10 @@ members of a group differ from the mean uncurated The analysis of a image (typically a digital image) of some type in order to extract information from it. http://edamontology.org/operation_3443 - + English 19.08.2022 - http://purl.obolibrary.org/obo/ncit.owl - EDAM + Image analysis [edam] plan specification @@ -10769,10 +9666,11 @@ members of a group differ from the mean uncurated A machine learning process using a function that maps an input to an output based on example input-output pairs. It infers a function from labeled training data consisting of a set of training examples. http://purl.obolibrary.org/obo/OBI_0002588 + English 19.08.2022 http://purl.obolibrary.org/obo/obi.owl - OBI + Supervised learning [obi] plan specification @@ -10848,7 +9746,7 @@ members of a group differ from the mean - counting events + counting events Sven Schwabe (IFNANO) 06.04.2022 31.03.2022 @@ -10868,7 +9766,7 @@ members of a group differ from the mean English 17.08.2022 allotrope - allotrope.org + count [allotrope] information content entity @@ -10884,7 +9782,7 @@ members of a group differ from the mean English 17.08.2022 allotrope - allotrope.org + count [allotrope] information content entity @@ -10901,7 +9799,7 @@ members of a group differ from the mean English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + count [ncit] information content entity @@ -10918,7 +9816,7 @@ members of a group differ from the mean English 19.08.2023 http://purl.obolibrary.org/obo/ms.owl - MS + count [ms] information content entity @@ -10930,12 +9828,12 @@ members of a group differ from the mean uncurated A single undivided thing (unit) based on or subject to individual judgment or preference, and not by necessity, reason, or principle. - http://purl.obolibrary.org/obo/NCIT_C75765 - + English 19.08.2022 + NCIT:C75765 http://purl.obolibrary.org/obo/ncit.owl - NCIT + arbitrary units willkürliche Einheiten information content entity @@ -11105,7 +10003,7 @@ sequence of additional like or unlike molecules under the conditions of the rele English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCIT + Monomer [ncit] material entity @@ -11115,7 +10013,7 @@ sequence of additional like or unlike molecules under the conditions of the rele - + a substance consisting of molecules characterised by the sequence of one or more types of monomer unit. Such molecules must be distributed over a range of molecular weights. Yamen Alsalka @@ -11132,33 +10030,15 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A polymer is a mixture, which is composed of macromolecules of different kinds and which may be differentiated by composition, length, degree of branching etc.. http://purl.obolibrary.org/obo/CHEBI_60027 - - English - 19.08.2022 - Kunststoff - CHEBI:60027 - http://purl.obolibrary.org/obo/chebi.owl - CHEBI - Polymer - polymer [chebi] - material entity - - - - - - - - - uncurated - A substance made up of variable numbers of repeating structural units linked through covalent bonds. - http://purl.obolibrary.org/obo/NCIT_C48803 - + English 19.08.2022 - http://purl.obolibrary.org/obo/ncit.owl - NCTI - polymer [ncit] + Kunststoff + CHEBI:60027 + http://purl.obolibrary.org/obo/chebi.owl + CHEBI + Polymer + polymer [chebi] material entity @@ -11185,7 +10065,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English 17.08.2022 http://www.aidimme.es/FurnitureSectorOntology.owl - Furniture Sector Ontology + Composition [fso] information content entity @@ -11198,10 +10078,11 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts. [PATO] http://purl.obolibrary.org/obo/PATO_0000025 + English 17.08.2022 - PATO - PATO + http://purl.obolibrary.org/obo/pato.owl + Composition [pato] information content entity @@ -11218,7 +10099,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English 19.08.2022 http://purl.obolibrary.org/obo/ncit.owl - NCTI + Composition [ncit] information content entity @@ -11276,7 +10157,6 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - Kleinste erkennbare sphärische oder beinahe sphärische Einheit, die als solche einzeln existieren kann Smallest discernible spherical or nearly spherical unit which can exist separately Teilchen @@ -11295,7 +10175,6 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - uncurated An object with finite mass and size parameters. http://purl.obolibrary.org/obo/ncit.owl @@ -11342,8 +10221,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu 03.05.2022 It is normally free from compounding ingredients but may also, for example, take the form of a masterbatch with oil and/or filler. Rohkautschuk ist normalerweise frei von Mischungsbestandteilen, kann jedoch zum Beispiel auch als Masterbatch mit Öl und/oder Füllstoff vorliegen. - Raw Rubber [dik] Rohkautschuk [dik] + raw rubber [dik] @@ -11360,7 +10239,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu DIN ISO 1382:2016-07 03.05.2022 Synthesekautschuk [dik] - Synthetic Rubber [dik] + synthetic rubber [dik] @@ -11377,7 +10256,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu ISO 1629:2013(E) 04.05.2022 M-Gruppe Kautschuk [dik] - M-group Rubber [dik] + M-group rubber [dik] @@ -11395,7 +10274,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu 03.05.2022 EPDM Ethylen-Propylen-Dien-‎Kautschuk ‎[dik] - Ethylene Propylene Diene Rubber [dik] + ethylene propylene diene rubber [dik] @@ -11411,8 +10290,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English DIN ISO 1382:2016-07 03.05.2022 - Diene Rubber [dik] Dienkautschuk [dik] + diene rubber [dik] @@ -11452,7 +10331,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated Mischungsbestandteil, der im Wesentlichen aus mehr als 95 % elementaren Kohlenstoffs in der Form beinahe sphärischer Partikel mit maximalen Durchmessern kleiner als 1 μm besteht, im Allgemeinen zu Aggregaten koalesziert compounding ingredient consisting essentially of more than 95 % elemental carbon in the form of nearspherical particles with major diameters less than 1 μm, generally coalesced into aggregates @@ -11462,8 +10341,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu 03.05.2022 Carbon black is produced by incomplete burning or thermal decomposition of hydrocarbons. Ruß wird durch unvollständige Verbrennung oder thermische Zersetzung von Kohlenwasserstoffen produziert. - Carbon Black [dik] Ruß [dik] + carbon black [dik] @@ -11471,18 +10350,26 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated An elemental carbon in the form of virtually pure colloidal particles that are produced by incomplete combustion or thermal decomposition of gaseous or liquid hydrocarbons under controlled conditions. A black, finely divided pellet or powder, its properties of specific surface area, particle size and structure, conductivity and colour can be varied by varying the exact conditions for its production. It is used in tyres, rubber and plastic products, printing inks and coatings. http://purl.obolibrary.org/obo/chebi.owl - + Lars Vogt Luis Ramos English - 24.08.2022 + 23.10.2023 24.08.2022 + CAS:1333-86-4 + KEGG:C19202 + PMID:24291665 + PMID:24669321 + PMID:25071917 + PMID:26803751 + Wikipedia:Carbon_black + CHEBI:82297 CHEBI - Carbon Black [chebi] Ruß [chebi] + carbon black [chebi] @@ -11498,8 +10385,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English ASTM D1765-10 05.05.2022 - N-Carbon Black [dik] N-Ruß [dik] + N-carbon black [dik] @@ -11515,8 +10402,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English ASTM D1765-10 05.05.2022 - S-Carbon Black [dik] S-Ruß [dik] + S-carbon black [dik] @@ -11688,13 +10575,15 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A class of substances that binds to, activates and increases the activity of a target. - http://purl.obolibrary.org/obo/ncit.owl - + + + AKHILESH VYAS Luis Ramos English 24.08.2022 24.08.2022 - NCIT + NCIT:C154897 + Aktivator [ncit] activator [ncit] @@ -11827,7 +10716,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated An azole in which the five-membered heterocyclic aromatic skeleton contains a N atom and one S atom. http://purl.obolibrary.org/obo/chebi.owl @@ -11836,7 +10725,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu English 05.05.2022 Thiazol [dik] - Thiazole [dik] + thiazole [dik] @@ -11899,9 +10788,10 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Alexander Aschemann English + 20.10.2023 05.05.2022 Thiuram [dik] - Thiuram [dik] + thiuram [dik] @@ -11976,10 +10866,11 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Alexander Aschemann English + 20.10.2023 05.05.2022 ZBDC - Zinc Dibenzyldithiocarbamate [dik] Zink-Dibenzyldithiocarbamat [dik] + zinc dibenzyldithiocarbamate [dik] @@ -12305,13 +11196,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A unit which is a standard measure of the number of repetitive actions in a particular time." [NIST:NIST] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - UO + Frequency Unit [uo] Frequenzeinheit [uo] @@ -12325,13 +11216,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated An indication of the type of unit of measure being used to express a number of regular events in a given time per unit of time. Unit of Frequency - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCTI + Frequency Unit [ncit] Frequenzeinheit [ncit] @@ -12391,7 +11282,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - Is a supervised classification method and it is used to build classification rules of a number of prespecified clases. + Is a supervised classification method and it is used to build classification rules of a number of prespecified clases. Unscrambler X Yamen Alsalka Yamen Alsalka @@ -12703,13 +11594,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The process by which food is torn or crushed by the teeth. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCTI + Mastication [ncit] Mastikation [ncit] @@ -12721,13 +11612,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The process of biting and mashing food with the teeth prior to swallowing. - http://purl.obolibrary.org/obo/hp.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - HP + Mastication [hp] Mastikation [hp] @@ -12771,13 +11662,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A mechanical device designed to blend materials or an electronic device designed to blend signals. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCIT + Mischer [ncit] Mixer Device [ncit] @@ -12804,13 +11695,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A mechanical component designed to blend materials. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCIT + Mechanical Mixer [ncit] Mechanischer Mischer [ncit] @@ -12955,6 +11846,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated + Drop Door Temperature Control Unit Alexander Aschemann English 21.05.2022 @@ -13105,13 +11997,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The linear extent in space from one end of something to the other end, or the extent of something from beginning to end. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCIT + Length [ncit] Länge [ncit] @@ -13123,13 +12015,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A 1-D extent quality which is equal to the distance between two points. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - PATO + Length [pato] Länge [pato] @@ -13141,13 +12033,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Length is the amount of space between two geographical points along a curve. It is a base quantity in the International System of Units and other systems of units. Length is speed times time. The metre, a base unit of length in the International System of Units, is defined in terms of speed of light during a certain time interval. - http://www.ontology-of-units-of-measure.org/resource/om-2 - + + Luis Ramos English 24.08.2022 24.08.2022 - OM + Length [om] Länge [om] @@ -13159,13 +12051,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated PEFF keyword for the sequence length. - http://purl.obolibrary.org/obo/ms.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - MS + Length [ms] Länge [ms] @@ -13192,13 +12084,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A unit which is a standard measure of the distance between two points." [Wikipedia:Wikipedia] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - UO + Length Unit [uo] Längen Einheit [uo] @@ -13212,13 +12104,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated An indication of the type of unit of measure being used to express a length or distance. Unit of Length - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCIT + Length Unit [ncit] Längen Einheit [ncit] @@ -13246,38 +12138,19 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A metric unit of length equal to one thousandth of a meter (10E-3 meter) or approximately 0.03937 inch. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - NCIT + millimeter [ncit] millimeter [ncit] - - - - - uncurated - "A length unit which is equal to one thousandth of a meter or 10^[-3] m." [NIST:NIST] - http://purl.obolibrary.org/obo/uo.owl - - Luis Ramos - English - 24.08.2022 - 24.08.2022 - UO - millimeter [uo] - millimeter [uo] - - - - @@ -13353,13 +12226,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Power is the time rate at which work is done. It is a derived quantity in the International System of Units. Power is energy divided by time. - http://www.ontology-of-units-of-measure.org/resource/om-2 - + + Luis Ramos English 24.08.2022 24.08.2022 - OM + Leistung [om] Power [om] @@ -13441,12 +12314,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A quantity of people or things treated or regarded as a group, especially when subdivided from a larger group. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 24.08.2022 - NCIT + Charge batch [ncit] @@ -13596,13 +12469,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A transformation in which an atom or group Y connected to two other atoms or groups X and Z is lost from a molecule, leading to a product in which X is bonded to Z, e.g. X-Y-Z --> X-Z + Y. - http://purl.obolibrary.org/obo/rex.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - REX + Extrudieren [rex] Extrusion [rex] @@ -13614,13 +12487,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A process used to create objects of a fixed cross-sectional profile by forcing or drawing a material through a die. - http://purl.obolibrary.org/obo/chmo.owl - + + Luis Ramos English 24.08.2022 24.08.2022 - CHMO + Extrudieren [chmo] Extrusion [chmo] @@ -13729,13 +12602,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The extended two-dimensional outer boundary of a three-dimensional object. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Oberfläche [ncit] Surface [ncit] @@ -13976,13 +12849,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated motor - http://purl.obolibrary.org/obo/envo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - ENVO + Engine [envo] Motor [envo] @@ -14244,13 +13117,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Any covalent linkage between two polymers or between two different regions of the same polymer. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Crosslink [ncit] Vernetzung [ncit] @@ -14328,15 +13201,15 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A device that is used to sterilize equipment and supplies by subjecting them to high pressure steam at 121 C or more, typically for 15 to 20 minutes depending on the size of the load and the contents. - http://purl.obolibrary.org/obo/obi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - OBI + Autoklav [obi] - autoclave[obi] + autoclave [obi] @@ -14346,13 +13219,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A thick-walled steel vessel used during synthesis methods that require both high pressures and high temperatures. - http://purl.obolibrary.org/obo/chmo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - CHMO + Autoklav [chmo] autoclave [chmo] @@ -14536,11 +13409,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated - http://purl.obolibrary.org/obo/pato.owl - + A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. + + Alexander Aschemann English 10.05.2022 + Physical Object Quality [dik] Qualität des physischen Objekts [dik] @@ -14552,13 +13427,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - PATO + Physical Object Quality [pato] Qualität des physischen Objekts [pato] @@ -14603,45 +13478,28 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated - http://purl.obolibrary.org/obo/pato.owl - + A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure. + + Alexander Aschemann English 10.05.2022 - PATO + Label der Messeinheit [dik] Measurement Unit Label [dik] - - - - uncurated - A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure. - http://purl.obolibrary.org/obo/iao.owl - - Luis Ramos - English - 25.08.2022 - 25.08.2022 - IAO - Label der Messeinheit [pato] - Measurement Unit Label [pato] - - - - uncurated - http://purl.obolibrary.org/obo/pato.owl - + Alexander Aschemann English 10.05.2022 + Bezugspunkt-Label [dik] Datum Label [dik] @@ -14653,12 +13511,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label - http://purl.obolibrary.org/obo/iao.owl - + Luis Ramos English 25.08.2022 25.08.2022 + IAO Bezugspunkt-Label [iao] Datum Label [iao] @@ -14672,11 +13530,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Test testing; test - http://purl.obolibrary.org/obo/pato.owl - + + Alexander Aschemann English 10.05.2022 + Prüfung [dik] assay [dik] @@ -14688,13 +13547,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A qualitative or quantitative analysis performed to determine the amount of a particular constituent in a sample or the biological or pharmacological properties of a drug. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Prüfung [ncit] assay [ncit] @@ -14706,13 +13565,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A planned process with the objective to produce information about the material entity that is the evaluant, by physically examining it or its proxies. - http://purl.obolibrary.org/obo/obi.owl - + Luis Ramos English 25.08.2022 25.08.2022 - OBI + test Prüfung [obi] assay [obi] @@ -14756,13 +13614,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A measure of the compactness of a substance, expressed as its mass per unit volume. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Mass Density [ncit] Massendichte [ncit] @@ -14774,13 +13632,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - PATO + Mass Density [pato] Massendichte [pato] @@ -14807,13 +13665,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A density unit which is a standard measure of the mass of a substance in a given volume." [UOC:GVG] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - UO + Mass Density Unit [uo] Massendichte Einheit [uo] @@ -14826,13 +13684,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated An indication of the type of unit of measure being used to express a mass density. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Massendichte Einheit [ncit] Unit Of Mass Density [ncit] @@ -14860,13 +13718,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A mass unit density which is equal to mass of an object in grams divided by the volume in cubic centimeters." [UOC:GVG] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - UO + Gram Per Cubic Centimeter [uo] Gramm pro Kubikzentimeter [uo] @@ -15258,13 +14116,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A unit of temperature of the temperature scale designed so that the freezing point of water is 0 degrees and the boiling point is 100 degrees at standard atmospheric pressure. The current official definition of the Celsius sets 0.01 C to be at the triple point of water and a degree to be 1/273.16 of the difference in temperature between the triple point of water and absolute zero. One degree Celsius represents the same temperature difference as one Kelvin. [ NCI ] - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Degree Celsius [ncit] Grad Celsius [ncit] @@ -15278,12 +14136,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A temperature unit which is equal to one kelvin degree. However, they have their zeros at different points. The centigrade scale has its zero at 273.15 K." [NIST:NIST] http://purl.obolibrary.org/obo/UO_0000027 - + Luis Ramos English 25.08.2022 25.08.2022 - UO + Degree Celsius [uo] Grad Celsius [uo] @@ -15295,13 +14153,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The degree Celsius is a unit of temperature defined as 1 kelvin. The degree Celsius is a derived unit in the International System of Units. - http://www.ontology-of-units-of-measure.org/resource/om-2 - + + Luis Ramos English 25.08.2022 25.08.2022 - OM + Degree Celsius [om] Grad Celsius [om] @@ -15326,13 +14184,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A planned process which results in physical changes in a specified input material - http://purl.obolibrary.org/obo/obi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - OBI + Material Processing [obi] Materialverarbeitung [obi] @@ -15361,13 +14219,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The normal action performed by a structure or device. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Function [ncit] Funktion [ncit] @@ -15380,13 +14238,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Biological function of a participant or of an interaction. - http://purl.obolibrary.org/obo/mi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - MI + Function [mi] Funktion [mi] @@ -15411,13 +14269,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated An object contrived for a specific purpose. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Device [ncit] Gerät [ncit] @@ -15429,13 +14287,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A material entity that is designed to perform a function in a scientific investigation, but is not a reagent. - http://purl.obolibrary.org/obo/obi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - OBI + Device [obi] Gerät [obi] @@ -15460,13 +14318,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Any device used to determine the dimension of an object. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCIT + Measurement Device [ncit] Messgerät [ncit] @@ -15478,13 +14336,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A device in which a measure function inheres. - http://purl.obolibrary.org/obo/obi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - OBI + Measurement Device [obi] Messgerät [obi] @@ -15540,13 +14398,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The combining of components, particles or layers into a more homogeneous state. The mixing may be achieved manually or mechanically by shifting the material with stirrers or pumps or by revolving or shaking the container. The process μst not permit segregation of particles of different size or properties. Homogeneity may be considered to have been achieved in a practical sense when the sampling error of the processed portion is negligible compared to the total error of the measurement system. [ https://doi.org/10.1351/goldbook.M03945 ] - http://purl.obolibrary.org/obo/chmo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - CHMO + Mischen [chmo] Mixing [chmo] @@ -15558,13 +14416,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated To bring or combine together or with something else; add as an additional element or part. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - NCTI + Mischen mix @@ -15671,13 +14529,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The ratio of the dynamic viscosity (μ) over the density of the fluid (ρ), which is noted as (length)^2/time. https://en.wikipedia.org/wiki/Viscosity#Kinematic_viscosity - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - UO + Kinematic Viscosity [uo] Kinematische Viskosität [uo] @@ -15715,13 +14573,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Molecular weight in g/mol, determined from molecular formula or sequence. - http://purl.obolibrary.org/obo/mi.owl - + + Luis Ramos English 25.08.2022 25.08.2022 - MI + Molecular Weight [mi] Molekulargewicht [mi] @@ -16165,13 +15023,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated Alexander Aschemann English 26.08.2022 21.05.2022 - Ethylene Group [dik] + ethylene group [dik] @@ -16179,12 +15037,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated Alexander Aschemann English 21.05.2022 - Hydrocarbylene Group [dik] + hydrocarbylene group [dik] @@ -16192,17 +15050,23 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated A bivalent group formed by removing two hydrogen atoms from a hydrocarbon, the free valencies of which are not engaged in a double bond. http://purl.obolibrary.org/obo/chebi.owl - + Lars Vogt Luis Ramos English - 26.08.2022 + 23.10.2023 26.08.2022 + hydrocarbylene group + hydrocarbylene groups + groupe hydrocarbylene + grupo hidrocarbileno + grupos hidrocarbileno + CHEBI:33471 CHEBI - Hydrocarbylene Group [chebi] + hydrocarbylene group [chebi] @@ -16227,11 +15091,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Any organic substituent group, regardless of functional type, having two free valences at carbon atom(s). http://purl.obolibrary.org/obo/chebi.owl - + Lars Vogt Luis Ramos English - 26.08.2022 + 23.10.2023 26.08.2022 + organodiyl groups + CHEBI:51422 CHEBI organodiyl group [chebi] @@ -16259,8 +15125,8 @@ types of monomer unit. Such molecules must be distributed over a range of molecu Alexander Aschemann English 21.05.2022 - Organic Group [dik] Organik-Gruppe [dik] + organic group [dik] @@ -16356,13 +15222,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A dimensionless ratio unit which denotes numbers as fractions of 100." [Wikipedia:Wikipedia] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - UO + Percent [uo] Prozent [uo] @@ -16374,13 +15240,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The percent is a unit of dimension one defined as 1/100. - http://www.ontology-of-units-of-measure.org/resource/om-2 - + + Luis Ramos English 26.08.2022 26.08.2022 - OM + Percent [om] Prozent [om] @@ -16493,12 +15359,12 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A unit which is a standard measure of physical quantity consisting of only a numerical number without any units." [Wikipedia:Wikipedia] - http://purl.obolibrary.org/obo/ms.owl + Luis Ramos English 26.08.2022 26.08.2022 - MS + Dimensionless Unit [ms] dimensionslose Einheit [ms] @@ -16562,13 +15428,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated "A dimensionless concentration unit which denotes the volume of the solute in mL per 100 mL of the resulting solution." [UOC:GVG] - http://purl.obolibrary.org/obo/uo.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - UO + Volume Percentage [uo] Volumenprozent [uo] @@ -16593,13 +15459,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - PATO + Concrentration [pato] Konzentration [pato] @@ -16611,13 +15477,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The concentration of a chemical compound. - http://edamontology.org - + + Luis Ramos English 26.08.2022 26.08.2022 - EDAM + Concrentration [edam] Konzentration [edam] @@ -16629,13 +15495,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated Experimental method output expressing the contribution of one constituent to the composition of a mixture. - http://purl.obolibrary.org/obo/chmo.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - CHMO + Concrentration [chmo] Konzentration [chmo] @@ -16647,13 +15513,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated The quantity of a substance per unit volume or weight; a measure of the amount of substance present in a unit amount of mixture, particularly, the amount of solute dissolved in a solvent. The amounts can be expressed as moles, masses, volumes, or parts. - http://purl.obolibrary.org/obo/ncit.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - NCIT + Concrentration [ncit] Konzentration [ncit] @@ -16665,13 +15531,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated the strength of a solution; number of molecules of a substance in a given volume - http://purl.dataone.org/odo/ECSO8.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - ECSO + Concrentration [ecso] Konzentration [ecso] @@ -16696,13 +15562,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 26.08.2022 26.08.2022 - PATO + Molecular Quality [pato] molekulare Qualität [pato] @@ -16741,15 +15607,15 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - + uncurated http://purl.obolibrary.org/obo/CHEBI_29853 Alexander Aschemann English 21.05.2022 - Ethylidene Group [dik] Ethylidengruppe [dik] + ethylidene group [dik] @@ -16803,12 +15669,13 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. - http://purl.obolibrary.org/obo/pato.owl - + + Luis Ramos English 26.08.2022 26.08.2022 + Optical Quality [pato] optische Qualität [dik] @@ -16831,7 +15698,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu - Removing noise or spikes in correlated data such as spectroscopic data using a row-oriented transformation. + Removing noise or spikes in correlated data such as spectroscopic data using a row-oriented transformation. Unscrambler X Yamen Alsalka Yamen Alsalka @@ -16998,14 +15865,14 @@ types of monomer unit. Such molecules must be distributed over a range of molecu uncurated A concentration quality inhering in a bearer by virtue of the bearer's containing acid (hydrogen ions). pH - - + + + AKHILESH VYAS Lars M Vogt English 01.09.2023 2023-09-01T09:06:40.923633Z - PATO:0001842 - PATO + Säuregrad acidity [pato] @@ -17017,7 +15884,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu add one of the individual of "curation status specification" - provide a human-readable definition of the type of entity the class refers to + provide a human-readable definition of the type of entity the class refers to GROUP: TIB PERSON: Lars Vogt template class @@ -17800,7 +16667,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu Sysmex Corporation, Kobe, Japan - WEB:http://www.sysmex.com/ + WEB:http://www.sysmex.com/ Sysmex Corporation, Kobe, Japan @@ -17874,7 +16741,7 @@ types of monomer unit. Such molecules must be distributed over a range of molecu eBioscience Karin Breuer - WEB:http://www.ebioscience.com/ + WEB:http://www.ebioscience.com/ eBioscience @@ -21434,65 +20301,6 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase - - true - GP(X)-enables->MF(Y)-part_of->BP(Z) => GP(X) involved_in BP(Z) e.g. if X enables 'protein kinase activity' and Y 'part of' 'signal tranduction' then X involved in 'signal transduction' - involved in BP - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -