From ed328180fbe4719d916b0cfd6a29bfc93273148c Mon Sep 17 00:00:00 2001
From: Brian Freeman <brian.d.freeman@gmail.com>
Date: Wed, 12 Jun 2024 10:01:28 -0500
Subject: [PATCH] DT-829 fixing upper case search (#8601)

[DT-829][risk=no] fixing variant search bug
---
 .../bigquery/cbdata/cb_variant_attribute_genes_data.json        | 2 +-
 .../org/pmiops/workbench/cohortbuilder/VariantQueryBuilder.java | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/api/src/bigquerytest/resources/bigquery/cbdata/cb_variant_attribute_genes_data.json b/api/src/bigquerytest/resources/bigquery/cbdata/cb_variant_attribute_genes_data.json
index 418f10b05c9..26c4b28bf6a 100644
--- a/api/src/bigquerytest/resources/bigquery/cbdata/cb_variant_attribute_genes_data.json
+++ b/api/src/bigquerytest/resources/bigquery/cbdata/cb_variant_attribute_genes_data.json
@@ -1,7 +1,7 @@
 [
   {
     "vid": "1-101504524-G-A",
-    "gene_symbol": "GENE"
+    "gene_symbol": "gene"
   },
   {
     "vid": "1-101504524-G-A",
diff --git a/api/src/main/java/org/pmiops/workbench/cohortbuilder/VariantQueryBuilder.java b/api/src/main/java/org/pmiops/workbench/cohortbuilder/VariantQueryBuilder.java
index 5efe37649f5..4b75d87b76c 100644
--- a/api/src/main/java/org/pmiops/workbench/cohortbuilder/VariantQueryBuilder.java
+++ b/api/src/main/java/org/pmiops/workbench/cohortbuilder/VariantQueryBuilder.java
@@ -100,7 +100,7 @@ WHERE vid IN (
             WHERE vid IN (
               SELECT vid
               FROM `${projectId}.${dataSetId}.cb_variant_attribute_genes`
-              WHERE gene_symbol = @singleGene
+              WHERE UPPER(gene_symbol) = @singleGene
             )
             """;