Manifest.toml

# This file is machine-generated - editing it directly is not advised

[[ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"

[[ArnoldiMethod]]
deps = ["LinearAlgebra", "Random", "StaticArrays"]
git-tree-sha1 = "f87e559f87a45bece9c9ed97458d3afe98b1ebb9"
uuid = "ec485272-7323-5ecc-a04f-4719b315124d"
version = "0.1.0"

[[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

[[Automa]]
deps = ["Printf", "ScanByte", "TranscodingStreams"]
git-tree-sha1 = "d50976f217489ce799e366d9561d56a98a30d7fe"
uuid = "67c07d97-cdcb-5c2c-af73-a7f9c32a568b"
version = "0.8.2"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BioGenerics]]
deps = ["TranscodingStreams"]
git-tree-sha1 = "6d3f3b474b3df2e83dc67ad12ec63aee4eb5241b"
uuid = "47718e42-2ac5-11e9-14af-e5595289c2ea"
version = "0.1.1"

[[BioSequences]]
deps = ["BioSymbols", "Random", "Twiddle"]
git-tree-sha1 = "a3092df369ea712e1b929b3cf1cdfebd44bde93f"
uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
version = "3.0.0"

[[BioSymbols]]
git-tree-sha1 = "b34c89c25be873c478e7c1072253546088934489"
uuid = "3c28c6f8-a34d-59c4-9654-267d177fcfa9"
version = "5.1.0"

[[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "9950387274246d08af38f6eef8cb5480862a435f"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.14.0"

[[ChangesOfVariables]]
deps = ["ChainRulesCore", "LinearAlgebra", "Test"]
git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1"
uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
version = "0.1.2"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "b153278a25dd42c65abbf4e62344f9d22e59191b"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.43.0"

[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"

[[DataAPI]]
git-tree-sha1 = "fb5f5316dd3fd4c5e7c30a24d50643b73e37cd40"
uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
version = "1.10.0"

[[DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "3daef5523dd2e769dad2365274f760ff5f282c7d"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.18.11"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[DocStringExtensions]]
deps = ["LibGit2"]
git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.8.6"

[[Downloads]]
deps = ["ArgTools", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"

[[FASTX]]
deps = ["Automa", "BioGenerics", "BioSequences", "BioSymbols", "TranscodingStreams"]
git-tree-sha1 = "2f080a912d3b82b6a5a22f90843be63a753a9e1d"
uuid = "c2308a5c-f048-11e8-3e8a-31650f418d12"
version = "1.3.0"

[[Inflate]]
git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c"
uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9"
version = "0.1.2"

[[InteractiveUtils]]
deps = ["Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[InverseFunctions]]
deps = ["Test"]
git-tree-sha1 = "91b5dcf362c5add98049e6c29ee756910b03051d"
uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
version = "0.1.3"

[[IrrationalConstants]]
git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151"
uuid = "92d709cd-6900-40b7-9082-c6be49f344b6"
version = "0.1.1"

[[LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"

[[LibCURL_jll]]
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"

[[LibGit2]]
deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"

[[LibSSH2_jll]]
deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"

[[Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[LightGraphs]]
deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
git-tree-sha1 = "432428df5f360964040ed60418dd5601ecd240b6"
uuid = "093fc24a-ae57-5d10-9952-331d41423f4d"
version = "1.3.5"

[[LinearAlgebra]]
deps = ["Libdl", "libblastrampoline_jll"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[LogExpFunctions]]
deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "76c987446e8d555677f064aaac1145c4c17662f8"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.14"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MacroTools]]
deps = ["Markdown", "Random"]
git-tree-sha1 = "3d3e902b31198a27340d0bf00d6ac452866021cf"
uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
version = "0.5.9"

[[Markdown]]
deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[MbedTLS_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"

[[Missings]]
deps = ["DataAPI"]
git-tree-sha1 = "bf210ce90b6c9eed32d25dbcae1ebc565df2687f"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "1.0.2"

[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"

[[NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"

[[OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"

[[OrderedCollections]]
git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.4.1"

[[Pkg]]
deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[Printf]]
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[Random]]
deps = ["SHA", "Serialization"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"

[[SIMD]]
git-tree-sha1 = "7dbc15af7ed5f751a82bf3ed37757adf76c32402"
uuid = "fdea26ae-647d-5447-a871-4b548cad5224"
version = "3.4.1"

[[ScanByte]]
deps = ["Libdl", "SIMD"]
git-tree-sha1 = "9cc2955f2a254b18be655a4ee70bc4031b2b189e"
uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb"
version = "0.3.0"

[[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"

[[SharedArrays]]
deps = ["Distributed", "Mmap", "Random", "Serialization"]
uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[SimpleTraits]]
deps = ["InteractiveUtils", "MacroTools"]
git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231"
uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d"
version = "0.9.4"

[[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SortingAlgorithms]]
deps = ["DataStructures"]
git-tree-sha1 = "b3363d7460f7d098ca0912c69b082f75625d7508"
uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
version = "1.0.1"

[[SparseArrays]]
deps = ["LinearAlgebra", "Random"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[StaticArrays]]
deps = ["LinearAlgebra", "Random", "Statistics"]
git-tree-sha1 = "cd56bf18ed715e8b09f06ef8c6b781e6cdc49911"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.4.4"

[[Statistics]]
deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[StatsAPI]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "c82aaa13b44ea00134f8c9c89819477bd3986ecd"
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
version = "1.3.0"

[[StatsBase]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "8977b17906b0a1cc74ab2e3a05faa16cf08a8291"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.33.16"

[[SubstitutionModels]]
deps = ["BioSymbols", "LinearAlgebra", "StaticArrays"]
git-tree-sha1 = "5e18123c57ff933efff915f4b44eb5d46a4089d1"
uuid = "8365b1bb-bd83-58ee-a267-f2965fc81c73"
version = "0.5.0"

[[TOML]]
deps = ["Dates"]
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"

[[Tar]]
deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"

[[Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[TranscodingStreams]]
deps = ["Random", "Test"]
git-tree-sha1 = "216b95ea110b5972db65aa90f88d8d89dcb8851c"
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
version = "0.9.6"

[[TreeTools]]
deps = ["Random"]
git-tree-sha1 = "b8147618b9571cfb94a184cf39b700717d38afd5"
repo-rev = "master"
repo-url = "../TreeTools"
uuid = "62f0eae3-8c0e-4032-a621-7756092209e5"
version = "0.3.1"

[[Twiddle]]
git-tree-sha1 = "29509c4862bfb5da9e76eb6937125ab93986270a"
uuid = "7200193e-83a8-5a55-b20d-5d36d44a0795"
version = "1.1.2"

[[UUIDs]]
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"

[[Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"

[[libblastrampoline_jll]]
deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"

[[nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"

[[p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"