From 594d7efd61198474baafa8a5665c8d656ac5b3b6 Mon Sep 17 00:00:00 2001 From: Michael L Heuer Date: Wed, 20 Mar 2024 09:01:11 -0500 Subject: [PATCH] Update minimap2 container image to 2.27--he4a0461_1. --- core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala b/core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala index 3c04a2c..2fc9b7f 100644 --- a/core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala +++ b/core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala @@ -36,8 +36,8 @@ class Minimap2Args extends ReadGroupArgs { @Args4jOption(required = false, name = "-executable", usage = "Path to the Minimap2 executable. Defaults to minimap2.") var executable: String = "minimap2" - @Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/minimap2:2.25--h7132678_0.") - var image: String = "quay.io/biocontainers/minimap2:2.25--h7132678_0" + @Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/minimap2:2.27--he4a0461_1.") + var image: String = "quay.io/biocontainers/minimap2:2.27--he4a0461_1" @Args4jOption(required = false, name = "-sudo", usage = "Run via sudo.") var sudo: Boolean = false