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update coveralls action; bump actions python to 3.10 viral-assemble CI #167: Commit 58c1296 pushed by tomkinsc
June 4, 2024 13:16 7m 43s ct-coverage-update
ct-coverage-update
June 4, 2024 13:16 7m 43s
Merge pull request #44 from broadinstitute/dp-scaffold viral-assemble CI #166: Commit 6178d2e pushed by tomkinsc
June 4, 2024 13:16 7m 46s ct-coverage-update
ct-coverage-update
June 4, 2024 13:16 7m 46s
Scheduled CodeQL #3: by github-advanced-security bot
May 30, 2024 13:51 1m 50s master
master
May 30, 2024 13:51 1m 50s
Scheduled CodeQL #2: by github-advanced-security bot
May 23, 2024 13:48 2m 15s master
master
May 23, 2024 13:48 2m 15s
CodeQL Setup CodeQL #1: by tfhartmann
May 21, 2024 20:53 2m 22s master
master
May 21, 2024 20:53 2m 22s
Merge pull request #44 from broadinstitute/dp-scaffold viral-assemble CI #165: Commit 6178d2e pushed by dpark01
March 28, 2024 21:45 7m 34s v2.3.1.4
v2.3.1.4
March 28, 2024 21:45 7m 34s
Merge pull request #44 from broadinstitute/dp-scaffold viral-assemble CI #164: Commit 6178d2e pushed by dpark01
March 28, 2024 21:35 7m 28s master
master
March 28, 2024 21:35 7m 28s
skani updates viral-assemble CI #163: Pull request #44 opened by dpark01
March 28, 2024 21:27 7m 33s dp-scaffold
dp-scaffold
March 28, 2024 21:27 7m 33s
update expected order viral-assemble CI #162: Commit 3aa29ec pushed by dpark01
March 28, 2024 21:14 7m 53s dp-scaffold
dp-scaffold
March 28, 2024 21:14 7m 53s
re-order skani output tsvs by ANI*Total_bases_covered viral-assemble CI #161: Commit 28aed63 pushed by dpark01
March 28, 2024 20:39 7m 43s dp-scaffold
dp-scaffold
March 28, 2024 20:39 7m 43s
clean up fasta headers in unit test to compare to expected viral-assemble CI #160: Commit 895a557 pushed by dpark01
March 28, 2024 20:37 7m 23s dp-scaffold
dp-scaffold
March 28, 2024 20:37 7m 23s
fix test imports viral-assemble CI #159: Commit 2edbb6e pushed by dpark01
March 28, 2024 18:25 7m 31s dp-scaffold
dp-scaffold
March 28, 2024 18:25 7m 31s
fix python path viral-assemble CI #158: Commit 3b47071 pushed by dpark01
March 28, 2024 18:12 7m 23s dp-scaffold
dp-scaffold
March 28, 2024 18:12 7m 23s
add some (failing) tests to require a certain output order from skani viral-assemble CI #157: Commit 3f54202 pushed by dpark01
March 28, 2024 17:27 7m 28s dp-scaffold
dp-scaffold
March 28, 2024 17:27 7m 28s
new default params for skani are able to detect across lasv more viral-assemble CI #156: Commit 8783d26 pushed by dpark01
March 28, 2024 14:11 7m 42s dp-scaffold
dp-scaffold
March 28, 2024 14:11 7m 42s
change default m and c for skani to even lower values based on experi… viral-assemble CI #155: Commit 3045822 pushed by dpark01
March 28, 2024 13:44 7m 25s dp-scaffold
dp-scaffold
March 28, 2024 13:44 7m 25s
Merge pull request #43 from broadinstitute/dp-scaffold viral-assemble CI #154: Commit f88c8f9 pushed by dpark01
March 20, 2024 20:24 7m 47s v2.3.1.3
v2.3.1.3
March 20, 2024 20:24 7m 47s
v2.3.1.3 viral-assemble CI #153: Release v2.3.1.3 created by dpark01
March 20, 2024 20:24 7m 28s
March 20, 2024 20:24 7m 28s
Merge pull request #43 from broadinstitute/dp-scaffold viral-assemble CI #152: Commit f88c8f9 pushed by dpark01
March 20, 2024 20:18 7m 35s master
master
March 20, 2024 20:18 7m 35s
expose common parameters for skani at argparse level viral-assemble CI #151: Pull request #43 synchronize by dpark01
March 20, 2024 20:08 7m 43s dp-scaffold
dp-scaffold
March 20, 2024 20:08 7m 43s
add default vals to python main funs viral-assemble CI #150: Commit 04c0f94 pushed by dpark01
March 20, 2024 20:08 7m 26s dp-scaffold
dp-scaffold
March 20, 2024 20:08 7m 26s
expose common parameters for skani at argparse level viral-assemble CI #149: Pull request #43 opened by dpark01
March 20, 2024 19:16 7m 16s dp-scaffold
dp-scaffold
March 20, 2024 19:16 7m 16s
expose more knobs for skani, change default -c from 30 to 20 and -s t… viral-assemble CI #148: Commit a456950 pushed by dpark01
March 20, 2024 19:09 7m 29s dp-scaffold
dp-scaffold
March 20, 2024 19:09 7m 29s
Merge pull request #42 from broadinstitute/dp-scaffold viral-assemble CI #147: Commit b986d1a pushed by dpark01
March 19, 2024 23:01 7m 49s v2.3.1.2
v2.3.1.2
March 19, 2024 23:01 7m 49s
v2.3.1.2 viral-assemble CI #146: Release v2.3.1.2 created by dpark01
March 19, 2024 23:01 7m 34s
March 19, 2024 23:01 7m 34s