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Releases: broadinstitute/viral-assemble

v2.1.10.0

18 Nov 20:01
@tomkinsc tomkinsc
v2.1.10.0
cfa4977
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v2.1.10.0
  • update viral-core to 2.1.10
  • drop trinity as an option for de novo assembly in favor of SPAdes (#21)
  • indel realign to disambiguated sequence in de novo assembly (#17)
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v2.1.9.0

13 Oct 21:43
@tomkinsc tomkinsc
v2.1.9.0
5ad0f6a
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v2.1.9.0

update viral-core to 2.1.9

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v2.1.8.0

21 Aug 06:11
@tomkinsc tomkinsc
v2.1.8.0
2f18b71
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v2.1.8.0

update viral-core to 2.1.8

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v2.1.4.0

20 Jun 17:00
@dpark01 dpark01
v2.1.4.0
2289f5d
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v2.1.4.0

bump viral-core to 2.1.4

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v2.1.3.1

19 Jun 16:47
@dpark01 dpark01
v2.1.3.1
907d347
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v2.1.3.1

Add assembly.py alignment_summary script (moved over from viral-core reports.py).

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v2.1.3.0

11 Jun 01:35
@dpark01 dpark01
v2.1.3.0
03750b3
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v2.1.3.0

Bump viral-core 2.1.1 to 2.1.3

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v2.1.1.0

09 Jun 21:53
@tomkinsc tomkinsc
v2.1.1.0
e401f2f
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v2.1.1.0

viral-core 2.1.0.0 -> 2.1.1.0

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v2.1.0.0

29 May 19:17
@tomkinsc tomkinsc
v2.1.0.0
a666df7
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v2.1.0.0

Updated:

  • viral-core 2.0.21 -> 2.1.0
  • mafft 7.402 -> 7.464
Assets 2
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v2.0.21.0

03 May 00:37
@dpark01 dpark01
v2.0.21.0
8eabf23
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v2.0.21.0

Update viral-core from 2.0.17 to 2.0.21

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v2.0.17.0

10 Apr 19:04
@dpark01 dpark01
v2.0.17.0
8d37f0a
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v2.0.17.0

Update viral-core from 2.0.16 to 2.0.17

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