Skip to content

Activity

abs path

dpark01pushed 1 commit to dp-genbank • db8063f…4656228 • 
3 hours ago

fix hmpv and hsv

dpark01pushed 1 commit to dp-genbank • ddd54eb…db8063f • 
3 hours ago

extend unusual tar handling to hmpv too

dpark01pushed 1 commit to dp-genbank • 76b9d99…ddd54eb • 
3 hours ago

fix output type of vadr_alerts

dpark01pushed 1 commit to dp-genbank • b129529…76b9d99 • 
5 hours ago

fix vadr.fail.tbl files

dpark01pushed 1 commit to dp-genbank • e85eb05…b129529 • 
5 hours ago

output feature table regardless of fail/pass

dpark01pushed 1 commit to dp-genbank • 2e5d959…e85eb05 • 
9 hours ago

fix quoting

dpark01pushed 1 commit to dp-genbank • 73bda7f…2e5d959 • 
11 hours ago

debug

dpark01pushed 1 commit to dp-genbank • 6b5097f…73bda7f • 
11 hours ago

up default ram

dpark01pushed 1 commit to dp-genbank • c80cb4a…6b5097f • 
12 hours ago

add ram profiling

dpark01pushed 1 commit to dp-genbank • dbc56b7…c80cb4a • 
14 hours ago

dont run naive liftover if vadr is supported

dpark01pushed 1 commit to dp-genbank • 85df888…dbc56b7 • 
14 hours ago

fix to work if id is biosample_accession instead of accession

dpark01pushed 1 commit to dp-genbank • 27b9320…85df888 • 
yesterday

handle input from biosample_json

dpark01pushed 1 commit to dp-genbank • 570c136…27b9320 • 
yesterday

defend against funny characters in data payload

dpark01pushed 1 commit to dp-genbank • a8c68e5…570c136 • 
yesterday

add genbank_single to dockstore

dpark01pushed 1 commit to dp-genbank • ab1bf1b…a8c68e5 • 
yesterday

deal with missing vals

dpark01pushed 1 commit to dp-genbank • 1644604…ab1bf1b • 
yesterday

fix cleanup of empty values

dpark01pushed 1 commit to dp-genbank • 65287f4…1644604 • 
yesterday

make biosample_to_table operate on all sequenced samples, not just su…

dpark01pushed 1 commit to dp-genbank • c8ebe55…65287f4 • 
yesterday

add new workflow to dockstore

dpark01pushed 1 commit to dp-genbank • 73b2da4…c8ebe55 • 
yesterday

add a metadata only management thing

dpark01pushed 1 commit to dp-genbank • a6c5961…73b2da4 • 
yesterday

first draft

dpark01pushed 1 commit to dp-genbank • 322a395…a6c5961 • 
yesterday

fix

dpark01pushed 1 commit to dp-genbank • 5242458…322a395 • 
8 days ago

consolidate

dpark01pushed 1 commit to dp-genbank • 81c1aa7…5242458 • 
8 days ago

genbank src updates

dpark01pushed 1 commit to dp-genbank • c45ba1c…81c1aa7 • 
8 days ago

add json-encoded biosample attributes to sample table

dpark01pushed 1 commit to dp-genbank • 98d8d3c…c45ba1c • 
8 days ago

filter src table

dpark01pushed 1 commit to dp-genbank • 7992ced…98d8d3c • 
8 days ago

python boolean titlecase

dpark01pushed 1 commit to dp-genbank • 068aade…7992ced • 
8 days ago

taxdump tarball needs to be unpacked first

dpark01pushed 1 commit to dp-genbank • c0ab015…068aade • 
8 days ago

fixes

dpark01pushed 1 commit to dp-genbank • e9e5a3c…c0ab015 • 
8 days ago

restore output needed for old workflow

dpark01pushed 1 commit to dp-genbank • 3590989…e9e5a3c • 
8 days ago