Activity
abs path
abs path
fix hmpv and hsv
fix hmpv and hsv
extend unusual tar handling to hmpv too
extend unusual tar handling to hmpv too
fix output type of vadr_alerts
fix output type of vadr_alerts
fix vadr.fail.tbl files
fix vadr.fail.tbl files
output feature table regardless of fail/pass
output feature table regardless of fail/pass
fix quoting
fix quoting
debug
debug
up default ram
up default ram
add ram profiling
add ram profiling
dont run naive liftover if vadr is supported
dont run naive liftover if vadr is supported
fix to work if id is biosample_accession instead of accession
fix to work if id is biosample_accession instead of accession
handle input from biosample_json
handle input from biosample_json
defend against funny characters in data payload
defend against funny characters in data payload
add genbank_single to dockstore
add genbank_single to dockstore
deal with missing vals
deal with missing vals
fix cleanup of empty values
fix cleanup of empty values
make biosample_to_table operate on all sequenced samples, not just su…
make biosample_to_table operate on all sequenced samples, not just su…
add new workflow to dockstore
add new workflow to dockstore
add a metadata only management thing
add a metadata only management thing
first draft
first draft
fix
fix
consolidate
consolidate
genbank src updates
genbank src updates
add json-encoded biosample attributes to sample table
add json-encoded biosample attributes to sample table
filter src table
filter src table
python boolean titlecase
python boolean titlecase
taxdump tarball needs to be unpacked first
taxdump tarball needs to be unpacked first
fixes
fixes
restore output needed for old workflow
restore output needed for old workflow