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NEWS
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Invenio NEWS
============
Here is a short summary of the most notable changes in Invenio
releases. For more information about the current release, please
consult RELEASE-NOTES. For more information about changes, please
consult ChangeLog.
Invenio v2.1.0 -- released 2015-06-16
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ docker:
- Disables debug mode when using standard Docker image. Uses docker
compose to set the variable instead.
Incompatible changes
~~~~~~~~~~~~~~~~~~~~
+ access:
- Removes proprietary authentication protocol for robotlogin.
(#2972)
- Removes external authentication engines. Please use
`invenio.modules.oauthclient` or Flask-SSO instead. (#1083)
+ assets:
- Removes support for runtime compiling of less files in debug mode
when option LESS_RUN_IN_DEBUG is enabled. (#2923)
- Requires update of bootstrap version of overlays.
+ collections:
- Collection reclist is not populated anymore. Use collection phrase
index using query matcher based on record data, hence no second
order operator will work in collection query definition.
+ communities:
- Removes 'communities' module that has been externalised to
separate Python package called 'invenio_communities'. Migration
can be done by running `pip install invenio_communities` and
adding 'invenio_communites' to PACKAGES. (#3008)
+ formatter:
- Database table 'format' and 'formatname' have been dropped and
foreign keys in other tables has been changed to use lower case
version of output format base filename without extension name.
- Output formats are no longer modifiable from web interface as they
syntax has been changed from custom "bfo" to "yml". (#2662)
- Custom output formats from the database needs to by merged with
`bfo` files to new `yml` files. Please follow instructions when
running `python scripts/output_format_migration_kit.py`.
+ global:
- Removes old URL handlers for `/search` and `/record`. (#2958)
- Enables 'sql_mode' as 'ansi_quotes' for quotes compatibility for
MySQL.
- Drops all active sessions during upgrade. Might result in log
entries about non-restorable sessions.
- Drops all active sessions during upgrade. Might result in log
entries about non-restorable sessions.
- Moves `deprecated` decorator under `invenio/utils/deprecation.py`
- Changes url_for behaviour to return always a unicode string.
(#2967)
- Deprecates invenio.config hack for legacy code. (#3106)
- Deprecates use of invenio.utils.redis in favor of
invenio.ext.cache. (#2885)
- Removes support for custom remote debuggers. (#2945)
+ installation:
- Upgrades minimum SQLAlchemy version to resolve Enum life cycle
problems on PostgreSQL. (#2351)
+ legacy:
- Specifies deprecation warnings for all remaining legacy modules
according to the latest Invenio 3 road map.
- Specifies deprecation warnings for legacy modules bibcirculation,
bibdocfile, bibedit, elmsubmit, websearch_external_collections,
and websubmit.
- Enables 'sql_mode' as 'ansi_quotes' for quotes compatibility for
MySQL.
- Removes deprecated bibknowledge module.
- Removes deprecated `inveniocfg` command line interface.
+ multimedia:
- Depreactes multimedia module.
+ search:
- Removes support for legacy `perform_request_search` and
`search_unit` API functions.
- Removes support for specific Aleph idendifiers from search engine.
New features
~~~~~~~~~~~~
+ access:
- Adds 'usedeposit' action which enables per user access
restrictions for different deposit types. (#2724)
- Adds the ability to restrict access per object independently from
the parent.
+ accounts:
- Adds support for allowing users to update their profile (nickname,
email, family name and given name).
- Adds support for users to re-request an verification email to be
sent.
- Adds new Passlib Flask extension to support configurable password
contexts in Invenio. (#2874)
- Adds panel blocks to settings templates.
+ babel:
- Adds datetime localization template filters.
+ collections:
- Adds new calculated field '_collections' to records from which the
'collection' index is created. (#2638)
+ deposit:
- Adds generic JinjaField and JinjaWidget to render templates as
form fields. This might be used in case longer explainations are
required for forms or to add pictures and other material that may
increase usability.
+ global:
- Uses Flask-IIIF extension providing various image manipulation
capabilities.
- Adds possibility to refer to documents and legacy BibDocFiles via
special path such as `/api/multimedia/image/recid:{recid}` or
`/api/multimedia/image/recid:{recid}-{filename}` or
`/api/multimedia/image/uuid` with proper permission checking.
(#3080) (#3084)
- Adds general pagination macro for Flask-SQLAlchemy Pagination
object. (PR #3006)
- Adds 'noscript' block to the page template to warn users with
disabled JavaScript on their browser. (#1039)
+ knowledge:
- Adds manager to knowledge with a command to load mappings into an
existing knowledge base from a file. E.g. `inveniomanage knowledge
load kb_name /path/to/file.kb`
+ oauthclient:
- Adds support for CERN OAuth authentication.
+ records:
- Adds support for granting author/viewer rights to records via tags
by specifying CFG_ACC_GRANT_AUTHOR_RIGHTS_TO_USERIDS_IN_TAGS
and/or CFG_ACC_GRANT_VIEWER_RIGHTS_TO_USERIDS_IN_TAGS. (#2873)
+ script:
- Implements optional TLS encryption directly by Werkzeug. Adds many
configuration variables (`SERVER_TLS_*`) to control the behaviour.
- Adds support for PostgreSQL database initialization.
+ search:
- Implements a mechanism that enhances user queries. The enhancer
functions are specified in the 'SEARCH_QUERY_ENHANCERS' and later
they are applied to the query AST one after the other in the
search method. (#2987)
- Adds new API for querying records.
- Adds new configuration option SEARCH_WALKERS which specifies
visitor classes that should be applied to a search query.
- Adds additional search units for the auxiliary author fields
`firstauthor`, `exactauthor`, `exactfirstauthor` and
`authorityauthor`.
- Adds missing operator handling of greater than (>) queries.
- Adds new configuration varibles `SEARCH_QUERY_PARSER` and
`SEARCH_QUERY_WALKERS` for query parser.
- Adds new API for record matching againts given query.
+ template:
- Adds bootstrap scrollspy to the base template so it can be used by
all modules.
+ workflows:
- Adds new buttons to the Holding Pen details pages to delete and
restart current task.
Improved features
~~~~~~~~~~~~~~~~~
+ accounts:
- Improves legend alignment in login form.
+ classifier:
- Improves the stripping of reference section when extracting text
from PDF by using a more appropriate refextract API.
+ deposit:
- Corrects reflow on narrow screens and removes misused classes for
labels.
- Adds sticky navigation item to the deposit page to simplify
overview on larger forms. Works well with collapsed elements. On
narrow screens the navigation gets pushed in front of all other
form elements.
- Improves handling of large files in deposit.
- Fixes problem with misaligned checkbox and radio list items. They
are produced because wtforms does not wrap input elements into
labels as it is intended by the bootstrap framework.
+ docker:
- Changes port number exposed by docker to non-reserved ones to
avoid conflicts with local installations. Webport is now 28080,
Redis 26379 and MySQL is 23306, which is a simple +20000 shift
from the standard ports.
- Integrates docker boot script into docker image.
- Changes docker boot script to use `exec`. This ensure signal
forwarding and reduces the overhead by one process. As a result
container shutdown is faster now.
- Changes manual master/slave configuration of Docker devboot script
to automatic solution using file locks.
+ formatter:
- Improves support for translated output format names on search
results page. (#2429)
+ global:
- Supports database creation on PostgreSQL server.
- Implements session signing. This avoids cache request for invalid
sessions and reduces the DDoS attack surface.
- Removes IP address storage+checks. This avoids data privacy issues
and enables users with multiple connections (e.g. WIFI+LTE,
multiple WIFI connections on trains+stations) to stay signed in.
- Enhances `run_py_func` to be able to print both to some StringIO
and to the terminal at the same time. This is enabled with the
`passthrough` argument. It now also always returns stderr,
deprecating the `capture_stderr` argument. The return value is now
a namedtuple so that one can easily fetch the required value. Its
arguments to a more natural order (name of the executable first
and arguments afterwards.
- Supports database creation on PostgreSQL server.
- Improves compatibility of Text fields in PostrgeSQL by changing
Text in models and removes Invenio hacks on MySQL Index and
Primary Key creation because starting from SQLAlchemy>=1.0 it
arises an exception if the length is specified. (#3037)
+ knowledge:
- Relaxes constraints on dynamic search function that used to force
us to create temporary knowledge base. (#698)
+ legacy:
- Supports database creation on PostgreSQL server.
+ oauthclient:
- Extra template block addition.
+ refextract:
- Replaces usage of 'urllib' by 'requests' library and improves
manipulation with temporary file used for extraction of
references.
+ script:
- Uses SQLAlchemy and SQLAlchemy-Utils to initialize the database
instead of executing mysql in a python subshell. (#2846) (#2844)
+ search:
- The search results pages emits proper Cache and TTL information in
its HTTP headers, so that any eventual external cachers (such as
varnish) could act accordingly to invalidate their caches
automatically, without any configuration. (#2302)
- Collection filtering of search results no longer returns orphan
records.
- Improves native facet creations.
+ template:
- Replaces Invenio PNG logo with SVG version. This works better on
high resolution (retina) screens and it is supported by all
browers.
+ unapi:
- Separates UnAPI url handling to a new module.
+ upgrader:
- Clarifies that the upgrade dependency is only a best guess.
(#2561)
+ workflows:
- Updates the layout of the details pages in Holding Pen to display
at which step the object is in the workflow.
- When rendering the task results, the Holding Pen now passes a
dictionary instead of a list in order to allow finer grained
control in the template.
Bug fixes
~~~~~~~~~
+ access:
- Sets the superadmin role ID properly when elaborating access
authorizations. Previously it was masked behind an application
context exception. (#3184)
+ accounts:
- Fixes invalid HTML of the 'remember me' login form checkbox.
- Corrects conditions on when to sent a notification email.
(addresses zenodo/zenodo#275) (#3163)
- Fixes issue that allowed blocked accounts to login.
+ classifier:
- Properly handles file paths containing a colon (:), avoiding bad
text extraction that causes (1) wrong results and (2) much slower
execution.
- Properly tags the execution of classifier as fast in the standard
workflow task when applicable.
+ deposit:
- Fixes issue with PLUpload chunking not being enabled.
- Fixes "both collapse arrows are shown" bug in deposit frontend.
+ formatter:
- Changes the mimetype of the `id` output format to application/json
and properly returns a JSON formatted list of results.
+ indexer:
- Avoids an exception from happening when passing a unicode string
to the BibIndex engine washer. (#2981)
+ installation:
- Fixes capitalization of package names.
+ legacy:
- Fixes inveniogc crash when mysql is NOT used to store sessions.
(#3205)
- Catches also any `MySQLdb.OperationalError` coming from legacy
MySQL queries using `run_sql()`. (#3089)
- Fixes an issue with outputting the post-process arguments when
adding or editing an OAI source.
+ oauthclient:
- Marks email address of users creating their account with oauth
process as invalid.
- Sends a validation email when users create their account with
oauth. (#2739)
- Improves security by leaving users' password uninitialized when
their account is created by the oauth module.
+ records:
- Improves type consistency of keys and values in JSON record
created from MARC and retrieved from storage engine. (#2772)
- Fixes double message flashing issues during 401 errors.
- Fixes issue with empty records not returning an 404 error.
- Fixes 500 error when record does not exist. (#2891)
+ search:
- Fixes an issue of returning the wrong results when searching for
single values in the author field (e.g. 'author:ellis').
+ submit:
- Fixes upgrade recipe for SbmCOLLECTION_SbmCOLLECTION table
introduced in commit @1021055. (#2954)
+ workflows:
- Fixes an issue where the workflow engine would try to save a
function reference in the extra_data task history, causing an
error when serializing extra_data.
Notes
~~~~~
+ access:
- The default access role ID for the superadmin user is 1, but it
can be configured via CFG_SUPERADMINROLE_ID.
- Requires running `webaccessadmin -u admin -c -a -D` command.
+ accounts:
- Changes user model fields family name/given names to store empty
string as default instead of null.
- Adds support for users to change email address/nickname. If you
store email addresses in e.g. records or fireroles you are
responsible for propagating the users change of email address by
adding listeners to the 'profile-updated' signal. Alternatively
you can migrate records (using
CFG_ACC_GRANT_AUTHOR_RIGHTS_TO_USERIDS_IN_TAGS and
CFG_ACC_GRANT_VIEWER_RIGHTS_TO_USERIDS_IN_TAGS) and fireroles
(using "allow/deny uid <uid>") to restrict access based on user id
instead of user email address.
- Refactors password hashing to (a) explicitly specify password salt
instead of relying on the email address, since a change of email
would cause the password to be invalidated (b) support multiple
password hashing algorithms concurrently (c) automatic migration
of deprecated hashes when users log in (d) allows overlays to
specify their preferred hashing algorithms.
- Deprecates legacy Invenio's hashing algorithm based on AES
encryption of email address using the password as secret key in
favor of SHA512 using random salt and 100000 rounds.
+ assets:
- Updates Twitter Bootstrap to 3.3 to fix some issues, e.g. to low
colour contrast of navbar background<->font. Requires update of
Twitter Bootstrap version in Invenio overlays.
+ collections:
- The tag table now contains 'collection idetifier' with correct
'value' and 'recjson_value' ('' and '_collections').
+ formatter:
- Invenio 1.x BFT template language and BFE elements are being
deprecated. Please migrate overlay output formats to use Jinja2.
(#2662)
- Removes fallback template rendering and puts standard exception
logging in place. (#2958)
+ global:
- Removes unused legacy cascade style sheets. (#2040)
+ indexer:
- The lower_index_term() now returns the term as a Unicode string
which can have an impact on custom tokenizers and regular
indexing.
+ installation:
- Adds missing access rights for database user accessing server from
localhost. (#3146)
+ records:
- Ports basic BibDocFile serving including access right checks.
(#3160)
+ unapi:
- Add `invenio.modules.unapi` to PACKAGES if you would like to keep
the `/unapi` url.
Invenio v2.0.4 -- released 2015-06-01
-------------------------------------
New features
~~~~~~~~~~~~
+ template:
- Adds Jinja2 filter 's' to convert anything to 'str'.
Improved features
~~~~~~~~~~~~~~~~~
+ BibDocFile:
- Escapes file name special characters including accents and spaces
in document URLs.
+ installation:
- Adds default priviledges for database user to access from any
host.
Bug fixes
~~~~~~~~~
+ arxiv:
- Adds proper quotation around OAI-PMH query to avoid a query parser
exception due to colons in the OAI identifiers.
+ global:
- Catches possible KeyError exceptions when using dotted notation in
a list to allow for the case when items are missing certain keys.
+ installation:
- Fixes syntax error in generated Apache virtual host configuration.
+ knowledge:
- Fixes HTML character encoding in admin templates. (#3118)
+ legacy:
- Changes the default timestamp to a valid datetime value when
reindexing via `-R`.
+ WebSearch:
- Removes special behaviour of the "subject" index that was hard-
coded based on the index name. Installations should rather
specify wanted behaviour by means of configurable tokeniser
instead.
Invenio v1.2.1 -- released 2015-05-21
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ BibAuthorID:
- Improves URL redirecting by properly quoting all URL parts, in
order to better protect against possible XSS attacks.
+ WebStyle:
- Adds back the `HttpOnly` cookie attribute in order to better
protect against potential XSS vulnerabilities. (#3064)
Improved features
~~~~~~~~~~~~~~~~~
+ installation:
- Apache virtual environments are now created with appropriate
`WSGIDaemonProcess` user value, taken from the configuration
variable `CFG_BIBSCHED_PROCESS_USER`, provided it is set. This
change makes it easier to run Invenio under non-Apache user
identity.
- Apache virtual environments are now created with appropriate
`WSGIPythonHome` directive so that it would be easier to run
Invenio from within Python virtual environments.
Bug fixes
~~~~~~~~~
+ BibDocFile:
- Safer upgrade recipe for migrations from the old document storage
model (used in v1.1) to the new document storage model (used in
v1.2).
+ WebSearch:
- Removes special behaviour of the "subject" index that was hard-
coded based on the index name. Installations should rather
specify wanted behaviour by means of configurable tokeniser
instead.
- Collection names containing slashes are now supported again.
However we recommend not to use slashes in collection names; if
slashes were wanted for aesthetic reasons, they can be added in
visible collection translations. (#2902)
+ global:
- Replaces `invenio-demo.cern.ch` by `demo.invenio-software.org`
which is the new canonical URL of the demo site. (#2867)
+ installation:
- Releases constraint on using an old version of `h5py` that was
anyway no longer available on PyPI.
+ testutils:
- Switches off SSL verification when running the test suite. Useful
for Python-2.7.9 where self-signed SSL certificates (that are
usually used on development installations) would cause apparent
test failures. (#2868)
Invenio v1.1.6 -- released 2015-05-21
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ WebStyle:
- Adds back the `HttpOnly` cookie attribute in order to better
protect against potential XSS vulnerabilities. (#3064)
Improved features
~~~~~~~~~~~~~~~~~
+ installation:
- Apache virtual environments are now created with appropriate
`WSGIDaemonProcess` user value, taken from the configuration
variable `CFG_BIBSCHED_PROCESS_USER`, provided it is set. This
change makes it easier to run Invenio under non-Apache user
identity.
- Apache virtual environments are now created with appropriate
`WSGIPythonHome` directive so that it would be easier to run
Invenio from within Python virtual environments.
Bug fixes
~~~~~~~~~
+ global:
- Replaces `invenio-demo.cern.ch` by `demo.invenio-software.org`
which is the new canonical URL of the demo site. (#2867)
+ testutils:
- Switches off SSL verification when running the test suite. Useful
for Python-2.7.9 where self-signed SSL certificates (that are
usually used on development installations) would cause apparent
test failures. (#2868)
Invenio v1.0.9 -- released 2015-05-21
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ WebStyle:
- Adds back the `HttpOnly` cookie attribute in order to better
protect against potential XSS vulnerabilities. (#3064)
Improved features
~~~~~~~~~~~~~~~~~
+ installation:
- Apache virtual environments are now created with appropriate
`WSGIDaemonProcess` user value, taken from the configuration
variable `CFG_BIBSCHED_PROCESS_USER`, provided it is set. This
change makes it easier to run Invenio under non-Apache user
identity.
- Apache virtual environments are now created with appropriate
`WSGIPythonHome` directive so that it would be easier to run
Invenio from within Python virtual environments.
Bug fixes
~~~~~~~~~
+ global:
- Replaces `invenio-demo.cern.ch` by `demo.invenio-software.org`
which is the new canonical URL of the demo site. (#2867)
+ testutils:
- Switches off SSL verification when running the test suite. Useful
for Python-2.7.9 where self-signed SSL certificates (that are
usually used on development installations) would cause apparent
test failures. (#2868)
Invenio v2.0.3 -- released 2015-05-15
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ script:
- Switches from insecure standard random number generator to secure
OS-driven entropy source (/dev/urandom on linux) for secret key
generation.
New features
~~~~~~~~~~~~
+ formatter:
- Adds html_class and link_label attributes to bfe_edit_record.
(#3020)
+ script:
- Adds `SERVER_BIND_ADDRESS` and `SERVER_BIND_PORT` to overwrite
bind address and port independently from the public URL. This
gives control over the used network interface as well as the
ability to bind Invenio to a protected port and use a reverse
proxy for access. Priority of the config is (1) runserver command
arguments, (2) `SERVER_BIND_ADDRESS` and `SERVER_BIND_PORT`
configuration, (3) data from `CFG_SITE_URL`, (4) defaults
(`127.0.0.1:80`).
Improved features
~~~~~~~~~~~~~~~~~
+ docker:
- Slims down docker image by building on top of less bloated base
image and only install what is really required. Also purges
unneeded packages, flushes caches and clean temporary files. All
these parts should not be in a production image and are also not
required by developers. You can still install components when
extending the Invenio base image.
+ docs:
- Adds missing 'libffi' library and howto start redis server.
Causing an exception when running `pip install --process-
dependency-links -e .[development]`: 'ffi.h' file not found and
'sudo: service: command not found' when starting redis server (OS
X Yosemite, 10.10).
- Adds a step describing how to install MySQL on CentOS 7 because it
does not have 'mysql-server' package by default.
Bug fixes
~~~~~~~~~
+ email:
- Fixes 'send_email' to expect an 'EmailMessage' object from the
'forge_email' method rather than a string-like object. (#3076)
- Fixes reference to CFG_SITE_ADMIN_EMAIL (not a global).
+ legacy:
- Makes lazy loading of `stopwords_kb` variable to avoid file
parsing during script loading. (#1462)
+ logging:
- Fixes Sentry proxy definition pointing to a wrong application
attribute.
+ matcher:
- Fixes Unicode conversion required to use the levenshtein_distance
function. (#3047)
Invenio v2.0.2 -- released 2015-04-17
-------------------------------------
Security fixes
~~~~~~~~~~~~~~
+ celery:
- Forces Celery to only accept msgpack content when using standard
configuration. This disallows pickle messages which can be used
for remote code execution. (#3003)
+ global:
- Disables all attempts to serve directory listings for directories
found under static root.
Incompatible changes
~~~~~~~~~~~~~~~~~~~~
+ celery:
- If you use any Celery serializer other than msgpack, you must
update configuration variable CELERY_ACCEPT_CONTENT to include
that serializer.
+ pidstore:
- Refactors DataCite provider to use the new external DataCite API
client.
- Removes DataCite API client from Invenio.
New features
~~~~~~~~~~~~
+ docs:
- Adds "Code of Conduct" to the "Community" documentation.
- Adds new fast track deprecation policy.
- Documents commit message labels used by developers (such as NEW,
SECURITY, FIX, etc.) used in automatic generation of structured
release notes. (#2856)
+ global:
- Adds a `inveniomanage config locate` command to request the
location of the instance config file.
- Adds new configurable variable `INVENIO_APP_CONFIG_ENVS` that can
be set both from `invenio.cfg` and OS environment. Application
factory iterates over comma separated list of configuration
variable names and updates application config with equivalent OS
environment value. (#2858)
+ template:
- Adds 'u' filter that converts str to unicode in Jinja2 templates
since support for str has been deprecated. Example: `{{ mystr|u
}}`. (#2862)
Improved features
~~~~~~~~~~~~~~~~~
+ docs:
- Adds example of how to deprecate a feature and includes
deprecation policy in documentation.
+ global:
- Moves datacite API wrapper to external package.
- Escapes all unicode characters in Jinja2 templates.
+ installation:
- Apache virtual environments are now created with appropriate
`WSGIDaemonProcess` user value, taken from the configuration
variable `CFG_BIBSCHED_PROCESS_USER`, provided it is set. This
change makes it easier to run Invenio under non-Apache user
identity.
- Apache virtual environments are now created with appropriate
`WSGIPythonHome` directive so that it would be easier to run
Invenio from within Python virtual environments.
+ jsonalchemy:
- Introduces support for accepting MARC fields having any
indicator. (#1722 #2075)
Bug fixes
~~~~~~~~~
+ admin:
- Adds `admin.js` bundle that loads `select2.js` library on `/admin`
pages. (#2690 #2781)
+ assets:
- Implements `__deepcopy__` method for `webassets.filter.option` in
order to fix unexpected behavior of the `option` class contructor.
(#2777 #2864 #2921)
+ documents:
- Flask-Login import in field definition. (#2905)
- Safer upgrade recipe for migrations from the old document storage
model (used in v1.1) to the new document storage model (used in
v1.2).
+ global:
- Drops support for serving directories in Apache site configuration
to avoid problems with loading '/admin' url without trailing slash
that attempts to serve the static directory of the same
name. (#2470 #2943)
+ installation:
- Adds Babel as setup requirements for installing compile_catalog
command.
+ jsonalchemy:
- Fixes the definition of time_and_place_of_event_note,
series_statement and source_of_description fields.
+ oairepository:
- Switches keys in CFG_OAI_METADATA_FORMATS configuration mapping.
(#2962)
- Amends bfe_oai_marcxml element since get_preformatted_record does
not return a tuple anymore.
+ search:
- Fixes portalbox text overflow and and syntax error in CSS.
(#3023)
- Collection names containing slashes are now supported again.
However we recommend not to use slashes in collection names; if
slashes were wanted for aesthetic reasons, they can be added in
visible collection translations. (#2902)
+ sorter:
- Comparison function of record tags uses space concatened string
from list of all tags values. (#2750)
Notes
~~~~~
+ assets:
- Adds deprecation warning when LESS_RUN_IN_DEBUG is used. (#2923)
+ global:
- Deprecates use of invenio.utils.datacite:DataCite (to be removed
in Invenio 2.2).