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I found that there are no SR reads in the result file, but I can see the SR reads on the IGV plot, and I want to confirm what kind read will be assigned as SR?
out result:
but region in IGV:
see the "IGV-SR" read cigars in bam file, we can find : the sum of the red position (figure below) == breakpoint position :
Whether the read does not cover the breakpoint is not determined as an SR?or other reasons?
The text was updated successfully, but these errors were encountered:
I found that there are no SR reads in the result file, but I can see the SR reads on the IGV plot, and I want to confirm what kind read will be assigned as SR?
out result:
but region in IGV:
see the "IGV-SR" read cigars in bam file, we can find : the sum of the red position (figure below) == breakpoint position :
Whether the read does not cover the breakpoint is not determined as an SR?or other reasons?
The text was updated successfully, but these errors were encountered: