TypeError: check_array() got an unexpected keyword argument 'warn_on_dtype'

[ErinKnochenhauer]

Good morning,

When attempting to recreate your first example (https://coclust.readthedocs.io/en/v0.2.1/examples.html) I am seeing a TypeError. Do you why this might be happening? Thanks for your help here!!

`---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
in
9
10 model = CoclustMod(n_clusters=4)
---> 11 model.fit(X)
12
13 print(model.modularity)

~/repos/bullseye/.venv/lib/python3.8/site-packages/coclust/coclustering/coclust_mod.py in fit(self, X, y)
91 random_state = check_random_state(self.random_state)
92
---> 93 check_array(X, accept_sparse=True, dtype="numeric", order=None,
94 copy=False, force_all_finite=True, ensure_2d=True,
95 allow_nd=False, ensure_min_samples=self.n_clusters,

~/repos/bullseye/.venv/lib/python3.8/site-packages/sklearn/utils/validation.py in inner_f(*args, **kwargs)
61 extra_args = len(args) - len(all_args)
62 if extra_args <= 0:
---> 63 return f(*args, **kwargs)
64
65 # extra_args > 0

TypeError: check_array() got an unexpected keyword argument 'warn_on_dtype'`

Here is my pip freeze for reference:
argon2-cffi==20.1.0
asn1crypto==1.4.0
async-generator==1.10
attrs==20.3.0
azure-common==1.1.26
azure-core==1.10.0
azure-storage-blob==12.7.1
backcall==0.2.0
bleach==3.3.0
bokeh==2.2.3
boto3==1.17.1
botocore==1.20.1
certifi==2020.12.5
cffi==1.14.4
chardet==3.0.4
click==7.1.2
coclust==0.2.1
colorcet==2.0.6
cryptography==3.3.1
cycler==0.10.0
Cython==0.29.21
decorator==4.4.2
defusedxml==0.6.0
docutils==0.15.2
entrypoints==0.3
hdbscan==0.8.27
holoviews==1.14.1
hvplot==0.7.0
idna==2.10
implicit==0.4.2
importlib-metadata==2.0.0
ipykernel==5.4.3
ipython==7.20.0
ipython-genutils==0.2.0
ipywidgets==7.6.3
isodate==0.6.0
jedi==0.18.0
Jinja2==2.11.3
jmespath==0.10.0
joblib==1.0.0
jsonschema==3.2.0
jupyter==1.0.0
jupyter-client==6.1.11
jupyter-console==6.2.0
jupyter-core==4.7.1
jupyterlab-pygments==0.1.2
jupyterlab-widgets==1.0.0
kiwisolver==1.3.1
Markdown==3.3.3
MarkupSafe==1.1.1
matplotlib==3.3.4
mistune==0.8.4
msrest==0.6.21
nbclient==0.5.1
nbconvert==6.0.7
nbformat==5.1.2
nest-asyncio==1.5.1
notebook==6.2.0
numpy==1.20.0
oauthlib==3.1.0
oscrypto==1.2.1
packaging==20.9
pandas==1.2.1
pandocfilters==1.4.3
panel==0.10.3
param==1.10.1
parso==0.8.1
patsy==0.5.1
pexpect==4.8.0
pickleshare==0.7.5
Pillow==8.1.0
plotly==4.11.0
prometheus-client==0.9.0
prompt-toolkit==3.0.14
ptyprocess==0.7.0
pycparser==2.20
pycryptodomex==3.9.9
pyct==0.4.8
Pygments==2.7.4
PyJWT==2.0.1
pyOpenSSL==19.1.0
pyparsing==2.4.7
pyrsistent==0.17.3
python-dateutil==2.8.1
pytz==2020.5
pyviz-comms==2.0.1
PyYAML==5.4.1
pyzmq==22.0.2
qtconsole==5.0.2
QtPy==1.9.0
requests==2.25.1
requests-oauthlib==1.3.0
retrying==1.3.3
s3transfer==0.3.4
scikit-learn==0.24.1
scipy==1.6.0
seaborn==0.11.1
Send2Trash==1.5.0
six==1.15.0
snowflake-connector-python==2.3.10
statsmodels==0.12.0
terminado==0.9.2
testpath==0.4.4
threadpoolctl==2.1.0
tornado==6.1
tqdm==4.56.0
traitlets==5.0.5
typing-extensions==3.7.4.3
urllib3==1.26.3
wcwidth==0.2.5
webencodings==0.5.1
widgetsnbextension==3.5.1

[habedi]

I get the same error. @ErinKnochenhauer, did you find any solutions?

[mcflem06]

I'm experiencing the same issue @ErinKnochenhauer

[mcflem06]

@habedi @ErinKnochenhauer - I managed to fix this just by removing the argument in coclust_mod.py. It's line 95.

[Arabasma]

The argument warn_on_dtype doesn't exist anymore for check_array ( you can check in the documentation of the function : https://scikit-learn.org/stable/modules/generated/sklearn.utils.check_array.html ). To make sure Coclust mod works, you need to remove it in the file coclust_mod.py