diff --git a/R/abn-package.R b/R/abn-package.R index 06f14755f..e1277af68 100644 --- a/R/abn-package.R +++ b/R/abn-package.R @@ -21,13 +21,15 @@ #' See also the files provided in the package directories \code{inst/bootstrapping_example} and \code{inst/old_vignette} for more details. #' #' @references -#' Kratzer, Gilles, Fraser Lewis, Arianna Comin, Marta Pittavino, and Reinhard Furrer. “Additive Bayesian Network Modeling with the R Package Abn.” Journal of Statistical Software 105 (January 28, 2023): 1–41. https://doi.org/10.18637/jss.v105.i08. +#' Kratzer G, Lewis F, Comin A, Pittavino M, Furrer R (2023). “Additive Bayesian Network Modeling with the R Package abn.” Journal of Statistical Software, 105(8), 1-41. https://doi.org/10.18637/jss.v105.i08. #' -#' Kratzer, G., Lewis, F.I., Comin, A., Pittavino, M. and Furrer, R. (2019). "Additive Bayesian Network Modelling with the R Package abn". arXiv preprint arXiv:1911.09006. +#' Delucchi M, Liechti J, Spinner G, Furrer R (2024). “abn: Additive Bayesian Networks.” Journal of Open Source Software, Accepted for publication. R package version 3.1.3, https://joss.theoj.org/papers/1bbc43a2be86f5d3f831cedb5cf81812. #' #' Lewis, F. I., and Ward, M. P. (2013). "Improving epidemiologic data analyses through multivariate regression modeling". Emerging themes in epidemiology, 10(1), 4. #' -#' Kratzer, G., Pittavino, M, Lewis, F. I., and Furrer, R., (2017). "abn: an R package for modelling multivariate data using additive Bayesian networks". R package version 2.2. https://CRAN.R-project.org/package=abn +#' Kratzer, G., Lewis, F.I., Willi, B., Meli, M.L., Boretti, F.S., Hofmann-Lehmann, R., Torgerson, P., Furrer, R. and Hartnack, S. (2020). "Bayesian Network Modeling Applied to Feline Calicivirus Infection Among Cats in Switzerland". Frontiers in Veterinary Science, 7, 73. +#' +#' Delucchi M, Furrer R, Kratzer G, Lewis F, Liechti J, Pittavino M, Cherneva K (2024). "abn: Modelling Multivariate Data with Additive Bayesian Networks". R package version 3.1.3, https://CRAN.R-project.org/package=abn. #' #' @examples #' ## Citations: diff --git a/inst/CITATION b/inst/CITATION index 4d07686dc..8b4652a18 100644 --- a/inst/CITATION +++ b/inst/CITATION @@ -1,3 +1,18 @@ +bibentry(bibtype = "Manual", + title = "abn: Modelling Multivariate Data with Additive Bayesian Networks", + author = c(person(given = "Matteo", family = "Delucchi", email = "matteo.delucchi@math.uzh.ch", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9327-1496")), + person(given = "Reinhard", family = "Furrer", email = "reinhard.furrer@math.uzh.ch", role = "aut", comment = c(ORCID = "0000-0002-6319-2332")), + person(given = "Gilles", family = "Kratzer", email = "gilles.kratzer@gmail.com", role = "aut", comment = c(ORCID = "0000-0002-5929-8935")), + person(given = "Fraser Iain", family = "Lewis", email = "fraser.iain.lewis@gmail.com", role = "aut", comment = c(ORCID = "0000-0003-4580-2712")), + person(given = "Jonas I.", family = "Liechti", email = "j-i-l@t4d.ch", role = "ctb", comment = c(ORCID = "0000-0003-3447-3060")), + person(given = "Marta", family = "Pittavino", email = "marta.pittavino@math.uzh.ch", role = "ctb", comment = c(ORCID = "0000-0002-1232-1034")), + person(given = "Kalina", family = "Cherneva", email = "kalinacherneva@gmail.com", role = "ctb")), + year = "2024", + note = "R package version 3.1.3", + url = "https://CRAN.R-project.org/package=abn", + header = "To cite the software implementation of the R package 'abn' use:" +) + bibentry(bibtype = "Article", title = "Additive Bayesian Network Modeling with the R Package abn", author = c(person(given = "Gilles", family = "Kratzer"), @@ -14,6 +29,20 @@ bibentry(bibtype = "Article", header = "To cite the methodology of the R package 'abn' use:" ) +bibentry(bibtype = "Article", + title = "abn: Additive Bayesian Networks", + author = c(person(given = "Matteo", family = "Delucchi", email = "matteo.delucchi@math.uzh.ch", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9327-1496")), + person(given = "Jonas I.", family = "Liechti", email = "j-i-l@t4d.ch", role = "ctb", comment = c(ORCID = "0000-0003-3447-3060")), + person(given = "Georg G.", family = "Spinner", role = "fnd", comment = c(ORCID = "0000-0001-9640-8155")), + person(given = "Reinhard", family = "Furrer", email = "reinhard.furrer@math.uzh.ch", role = "aut", comment = c(ORCID = "0000-0002-6319-2332"))), + year = "2024", + journal = "Journal of Open Source Software", + volume = "Accepted for publication", + note = "R package version 3.1.3", + url = "https://joss.theoj.org/papers/1bbc43a2be86f5d3f831cedb5cf81812", + header = "To cite the application of mixed-effects ABN use:" +) + bibentry(bibtype = "Article", title = "Bayesian Network Modeling Applied to Feline Calicivirus Infection Among Cats in Switzerland", author = c(person(given = "Gilles", family = "Kratzer"), @@ -31,17 +60,3 @@ bibentry(bibtype = "Article", textVersion = paste("Kratzer, G., Lewis, F.I., Willi, B., Meli, M.L., Boretti, F.S., Hofmann-Lehmann, R., Torgerson, P., Furrer, R. and Hartnack, S. (2020). Bayesian Network Modeling Applied to Feline Calicivirus Infection Among Cats in Switzerland. Frontiers in Veterinary Science, 7, 73") ) - -bibentry(bibtype = "Manual", - title = "abn: Modelling Multivariate Data with Additive Bayesian Networks", - author = c(person(given = "Reinhard", family = "Furrer"), - person(given = "Gilles", family = "Kratzer"), - person(given = "Fraser Iain", family = "Lewis")), - year = "2023", - note = "R package version 2.7-2", - url = "https://CRAN.R-project.org/package=abn", - header = "To cite the software implementation of the R package 'abn' use:", - textVersion = - paste("Furrer, R., Kratzer, G. and Lewis, F.I. (2023). abn: Modelling Multivariate Data with Additive Bayesian Networks. R package version 2.7-2. - https://CRAN.R-project.org/package=abn") -) diff --git a/man/abn-package.Rd b/man/abn-package.Rd index a294e1be7..94130bdd4 100644 --- a/man/abn-package.Rd +++ b/man/abn-package.Rd @@ -45,13 +45,15 @@ print(citation('abn'), bibtex=TRUE) # edit(file=paste0( path.package('abn'),'/bootstrapping_example/README.md')) } \references{ -Kratzer, Gilles, Fraser Lewis, Arianna Comin, Marta Pittavino, and Reinhard Furrer. “Additive Bayesian Network Modeling with the R Package Abn.” Journal of Statistical Software 105 (January 28, 2023): 1–41. https://doi.org/10.18637/jss.v105.i08. +Kratzer G, Lewis F, Comin A, Pittavino M, Furrer R (2023). “Additive Bayesian Network Modeling with the R Package abn.” Journal of Statistical Software, 105(8), 1-41. https://doi.org/10.18637/jss.v105.i08. -Kratzer, G., Lewis, F.I., Comin, A., Pittavino, M. and Furrer, R. (2019). "Additive Bayesian Network Modelling with the R Package abn". arXiv preprint arXiv:1911.09006. +Delucchi M, Liechti J, Spinner G, Furrer R (2024). “abn: Additive Bayesian Networks.” Journal of Open Source Software, Accepted for publication. R package version 3.1.3, https://joss.theoj.org/papers/1bbc43a2be86f5d3f831cedb5cf81812. Lewis, F. I., and Ward, M. P. (2013). "Improving epidemiologic data analyses through multivariate regression modeling". Emerging themes in epidemiology, 10(1), 4. -Kratzer, G., Pittavino, M, Lewis, F. I., and Furrer, R., (2017). "abn: an R package for modelling multivariate data using additive Bayesian networks". R package version 2.2. https://CRAN.R-project.org/package=abn +Kratzer, G., Lewis, F.I., Willi, B., Meli, M.L., Boretti, F.S., Hofmann-Lehmann, R., Torgerson, P., Furrer, R. and Hartnack, S. (2020). "Bayesian Network Modeling Applied to Feline Calicivirus Infection Among Cats in Switzerland". Frontiers in Veterinary Science, 7, 73. + +Delucchi M, Furrer R, Kratzer G, Lewis F, Liechti J, Pittavino M, Cherneva K (2024). "abn: Modelling Multivariate Data with Additive Bayesian Networks". R package version 3.1.3, https://CRAN.R-project.org/package=abn. } \seealso{ Useful links: