diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 30954f4..a9ddb02 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -14,9 +14,6 @@ repos:
   - id: check-json
   - id: check-yaml
   - id: check-case-conflict
-  - id: fix-encoding-pragma
-    args:
-    - --remove
   - id: mixed-line-ending
 - repo: https://github.com/glotzerlab/fix-license-header
   rev: v0.4.1
@@ -44,12 +41,12 @@ repos:
     - --keep-after=.. include
     - --comment-prefix=..
 - repo: https://github.com/pre-commit/mirrors-clang-format
-  rev: v19.1.2
+  rev: v19.1.4
   hooks:
   - id: clang-format
     types_or: [c, c++, cuda, inc]
 - repo: https://github.com/astral-sh/ruff-pre-commit
-  rev: v0.7.1
+  rev: v0.8.1
   hooks:
     - id: ruff-format
     - id: ruff