From 5cbb8828e9251d3aae3fabf601a005078e60631c Mon Sep 17 00:00:00 2001 From: Jeffrey Grover Date: Sat, 18 Apr 2020 15:11:14 -0700 Subject: [PATCH] Minor change to readme.md before merge --- README.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 65eb88b..2db03b5 100644 --- a/README.md +++ b/README.md @@ -43,7 +43,9 @@ Currently, the workflow expects an R1 and R2 file for each sample. Place the individual .fastq.gz files for R1 and R2 into the input_data directory. Once you have all the required dependencies installed run the workflow with: -`snakemake --cores {cores_here}` +```shell +snakemake --cores {cores_here} +``` However, it is recommended to use the supplied [Docker](https://www.docker.com/) image.