zamp.CITATION

Please consider citing following tools:

Snaketool:
https://doi.org/10.1371/journal.pcbi.1010705

Snakemake:
https://doi.org/10.12688/f1000research.29032.1

DADA2:
https://doi.org/10.1038/nmeth.3869

VSEARCH:
https://doi.org/10.7717/peerj.2584

Decipher:
https://doi.org/10.1128/AEM.02627-17

QIIME1:
https://doi.org/10.1038/nmeth.f.303

QIIME1_RDP:
https://doi.org/10.1186/s12863-022-01067-5

rdp_classifier:
https://doi.org/10.1038/hdy.2016.102

simulatePCR:
https://doi.org/10.1186/1471-2105-15-237

in_silico_pcr:
https://github.com/egonozer/in_silico_pcr

SRA toolkit:
https://doi.org/10.3390/foods12112140

FastQC:
http://www.bioinformatics.babraham.ac.uk/projects/fastqc

MultiQC:
https://doi.org/10.1093/bioinformatics/btw354

Greengenes2:
https://doi.org/10.1038/s41587-023-01845-1

SILVA:
https://doi.org/10.1093/nar/gks1219

EzBioCloud:
https://doi.org/10.1099/ijsem.0.001755

Cutadapt:
https://doi.org/10.14806/ej.17.1.200

pandaseq:
https://doi.org/10.1186/1471-2105-13-31

assembly_finder:
https://doi.org/10.5281/zenodo.13985668

TreeShrink:
https://doi.org/10.1186/s12864-018-4620-2

Krona:
https://doi.org/10.1007/978-1-4899-7478-5_802