From 795f91adc9e1504812565a57974ae1b29c284545 Mon Sep 17 00:00:00 2001 From: valscherz Date: Tue, 3 Mar 2020 11:48:16 +0100 Subject: [PATCH] Include Silva in DB build during insilico docker build --- data/validation_datasets/16S_config_in_silico.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/data/validation_datasets/16S_config_in_silico.yml b/data/validation_datasets/16S_config_in_silico.yml index 9039203d..13e4924f 100644 --- a/data/validation_datasets/16S_config_in_silico.yml +++ b/data/validation_datasets/16S_config_in_silico.yml @@ -14,7 +14,7 @@ threeprime: 2 # Number of match at the 3' end for a hit to be considered ### Database used for taxonomic assignment -tax_DB: ["ezbiocloud201805.201909", "ezbiocloud201805"] # must be the name of the folder containing files named "DB_amp.fasta" and "DB_amp_taxonomy.txt" in /data/. Can be multiple. +tax_DB: ["ezbiocloud201805.201909", "ezbiocloud201805", "Silva132.201908"] # must be the name of the folder containing files named "DB_amp.fasta" and "DB_amp_taxonomy.txt" in /data/. Can be multiple. classifier: ["qiimerdp", "dada2rdp", "decipher"] ### Processing for comparison of taxonomic assignment