diff --git a/deprecated-list.html b/deprecated-list.html index c7383ca..dc8338c 100644 --- a/deprecated-list.html +++ b/deprecated-list.html @@ -413,11 +413,16 @@

Contents

+org.micromanager.data.SummaryMetadata.copy() +
- Use SummaryMetadata.Builder.copyBuilder instead
+ + + org.micromanager.data.Coords.copy()
Use copyBuilder instead
- + org.micromanager.data.Metadata.copy()
Use the appropriate of the following: Metadata.copyBuilderPreservingUUID(), Metadata.copyBuilderWithNewUUID(), @@ -425,11 +430,6 @@

Contents

copyBuilderPreservingUUID.
- -org.micromanager.data.SummaryMetadata.copy() -
- Use SummaryMetadata.Builder.copyBuilder instead
- - org.micromanager.display.DisplaySettings.copy() diff --git a/org/micromanager/class-use/PropertyMap.html b/org/micromanager/class-use/PropertyMap.html index 5757384..7ef5c7b 100644 --- a/org/micromanager/class-use/PropertyMap.html +++ b/org/micromanager/class-use/PropertyMap.html @@ -140,29 +140,29 @@

Uses of -PropertyMap -PropertyManager.emptyPropertyMap() -
Returns an empty property map.
- - - static PropertyMap PropertyMaps.emptyPropertyMap()
Return the empty property map.
- + PropertyMap -PropertyManager.fromJSON(java.lang.String json) -
Creates a property map from its JSON-serialized form.
+PropertyManager.emptyPropertyMap() +
Returns an empty property map.
- + static PropertyMap PropertyMaps.fromJSON(java.lang.String json)
Create a property map from its JSON-serialized form.
+ +PropertyMap +PropertyManager.fromJSON(java.lang.String json) +
Creates a property map from its JSON-serialized form.
+ + PropertyMap PropertyMap.getPropertyMap(java.lang.String key) @@ -175,14 +175,14 @@

Uses of PropertyMap aDefault)  -PropertyMap -PropertyManager.loadJSON(java.io.File file) +static PropertyMap +PropertyMaps.loadJSON(java.io.File file)
Create a property map from its JSON-serialized form stored in a file.
-static PropertyMap -PropertyMaps.loadJSON(java.io.File file) +PropertyMap +PropertyManager.loadJSON(java.io.File file)
Create a property map from its JSON-serialized form stored in a file.
@@ -194,20 +194,20 @@

Uses of PropertyMap -PositionList.toPropertyMap() -
Creates a PropertyMap from this PositionList.
+MultiStagePosition.toPropertyMap() +
Returns a propertymap describing this MultiStagePosition.
PropertyMap -StagePosition.toPropertyMap() -
Returns this StagePosition instance as a PropertyMap.
+PositionList.toPropertyMap() +
Creates a PropertyMap from this PositionList.
PropertyMap -MultiStagePosition.toPropertyMap() -
Returns a propertymap describing this MultiStagePosition.
+StagePosition.toPropertyMap() +
Returns this StagePosition instance as a PropertyMap.
@@ -239,17 +239,17 @@

Uses of -static StagePosition -StagePosition.fromPropertyMap(PropertyMap pmap) -
Returns the given PrropertyMap as a StagePosition.
- - - static MultiStagePosition MultiStagePosition.fromPropertyMap(PropertyMap pmap)
Generates a multistagePosition from the given PropertyMap.
+ +static StagePosition +StagePosition.fromPropertyMap(PropertyMap pmap) +
Returns the given PrropertyMap as a StagePosition.
+ + PropertyMap PropertyMap.getPropertyMap(java.lang.String key, @@ -356,14 +356,14 @@

Uses of PropertyMap -Metadata.getUserData() -
Arbitrary additional metadata added by third-party code.
+SummaryMetadata.getUserData() +
Any general-purpose user meta data.
PropertyMap -SummaryMetadata.getUserData() -
Any general-purpose user meta data.
+Metadata.getUserData() +
Arbitrary additional metadata added by third-party code.
@@ -431,24 +431,24 @@

Uses of -Metadata.Builder -Metadata.Builder.userData(PropertyMap userData) -
Add user-defined data.
- +SummaryMetadata.Builder +SummaryMetadata.Builder.userData(PropertyMap userData)  -Metadata.MetadataBuilder -Metadata.MetadataBuilder.userData(PropertyMap userData) +SummaryMetadata.SummaryMetadataBuilder +SummaryMetadata.SummaryMetadataBuilder.userData(PropertyMap userData)
Deprecated. 
  -SummaryMetadata.Builder -SummaryMetadata.Builder.userData(PropertyMap userData)  +Metadata.Builder +Metadata.Builder.userData(PropertyMap userData) +
Add user-defined data.
+ -SummaryMetadata.SummaryMetadataBuilder -SummaryMetadata.SummaryMetadataBuilder.userData(PropertyMap userData) +Metadata.MetadataBuilder +Metadata.MetadataBuilder.userData(PropertyMap userData)
Deprecated. 
  @@ -468,13 +468,13 @@

Uses of PropertyMap -Overlay.getConfiguration() +AbstractOverlay.getConfiguration()
Return the user-customizable settings for this overlay.
PropertyMap -AbstractOverlay.getConfiguration() +Overlay.getConfiguration()
Return the user-customizable settings for this overlay.
@@ -489,13 +489,13 @@

Uses of void -Overlay.setConfiguration(PropertyMap config) +AbstractOverlay.setConfiguration(PropertyMap config)
Configure the overlay with the given parameters.
void -AbstractOverlay.setConfiguration(PropertyMap config) +Overlay.setConfiguration(PropertyMap config)
Configure the overlay with the given parameters.
diff --git a/org/micromanager/data/class-use/Coords.html b/org/micromanager/data/class-use/Coords.html index c018831..d22bbab 100644 --- a/org/micromanager/data/class-use/Coords.html +++ b/org/micromanager/data/class-use/Coords.html @@ -252,14 +252,14 @@

Uses of void -RewritableDatastore.deleteImage(Coords coords) -
Delete an image from the Datastore.
+RewritableStorage.deleteImage(Coords coords) +
Delete an image from the Storage.
void -RewritableStorage.deleteImage(Coords coords) -
Delete an image from the Storage.
+RewritableDatastore.deleteImage(Coords coords) +
Delete an image from the Datastore.
@@ -390,14 +390,14 @@

Uses of Coords -DisplayPositionChangedEvent.getDisplayPosition() -
returns the new display position.
+AbstractDataViewer.getDisplayPosition() +
Implements getDisplayPosition.
Coords -AbstractDataViewer.getDisplayPosition() -
Implements getDisplayPosition.
+DisplayPositionChangedEvent.getDisplayPosition() +
returns the new display position.
diff --git a/org/micromanager/data/class-use/Datastore.html b/org/micromanager/data/class-use/Datastore.html index 4e5b531..e9ad859 100644 --- a/org/micromanager/data/class-use/Datastore.html +++ b/org/micromanager/data/class-use/Datastore.html @@ -268,36 +268,36 @@

Uses of Datastore -ImageOverwrittenEvent.getDatastore() -
Provides the Datastore this image was added to; potentially useful for - code that listens to events from multiple Datastores.
- - - -Datastore DatastoreClosingEvent.getDatastore()
Returns the Datastore that is closing.
- + Datastore Pipeline.getDatastore()
Get the output Datastore for this Pipeline.
- + Datastore -ImageDeletedEvent.getDatastore() +ImageOverwrittenEvent.getDatastore()
Provides the Datastore this image was added to; potentially useful for code that listens to events from multiple Datastores.
- + Datastore Annotation.getDatastore()
Return the datastore to which this annotation is associated.
+ +Datastore +ImageDeletedEvent.getDatastore() +
Provides the Datastore this image was added to; potentially useful for + code that listens to events from multiple Datastores.
+ + Datastore DataManager.loadData(java.awt.Component parent, diff --git a/org/micromanager/data/class-use/Image.html b/org/micromanager/data/class-use/Image.html index 9958a3d..fd3e4e9 100644 --- a/org/micromanager/data/class-use/Image.html +++ b/org/micromanager/data/class-use/Image.html @@ -514,7 +514,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -525,7 +525,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -545,7 +545,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -556,7 +556,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, diff --git a/org/micromanager/data/class-use/SummaryMetadata.html b/org/micromanager/data/class-use/SummaryMetadata.html index 5845ce5..fe66403 100644 --- a/org/micromanager/data/class-use/SummaryMetadata.html +++ b/org/micromanager/data/class-use/SummaryMetadata.html @@ -140,13 +140,13 @@

Uses of SummaryMetadata -DataProviderHasNewSummaryMetadataEvent.getSummaryMetadata() +DataProvider.getSummaryMetadata()
Returns Summary Metadata.
SummaryMetadata -DataProvider.getSummaryMetadata() +DataProviderHasNewSummaryMetadataEvent.getSummaryMetadata()
Returns Summary Metadata.
diff --git a/org/micromanager/display/class-use/DataViewer.html b/org/micromanager/display/class-use/DataViewer.html index 218aeb2..40f0896 100644 --- a/org/micromanager/display/class-use/DataViewer.html +++ b/org/micromanager/display/class-use/DataViewer.html @@ -146,20 +146,20 @@

Uses of DataViewer -DisplaySettingsChangedEvent.getDataViewer() -
Get the data viewer.
+DisplayDidShowImageEvent.getDataViewer() +
Returns the Dataviewer displaying the image.
DataViewer -DisplayDidShowImageEvent.getDataViewer() -
Returns the Dataviewer displaying the image.
+DisplayPositionChangedEvent.getDataViewer() +
The dataViewer posting this event.
DataViewer -DisplayPositionChangedEvent.getDataViewer() -
The dataViewer posting this event.
+DisplaySettingsChangedEvent.getDataViewer() +
Get the data viewer.
diff --git a/org/micromanager/display/class-use/DisplaySettings.html b/org/micromanager/display/class-use/DisplaySettings.html index cdee6a8..03bd836 100644 --- a/org/micromanager/display/class-use/DisplaySettings.html +++ b/org/micromanager/display/class-use/DisplaySettings.html @@ -120,20 +120,20 @@

Uses of DisplaySettings -DisplaySettingsChangedEvent.getDisplaySettings() -
Get the new display settings.
+DataViewer.getDisplaySettings() +
Get the current display settings.
DisplaySettings -DataViewer.getDisplaySettings() -
Get the current display settings.
+AbstractDataViewer.getDisplaySettings() +
Implements getDisplaySettings.
DisplaySettings -AbstractDataViewer.getDisplaySettings() -
Implements getDisplaySettings.
+DisplaySettingsChangedEvent.getDisplaySettings() +
Get the new display settings.
@@ -226,7 +226,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -237,7 +237,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, diff --git a/org/micromanager/display/overlay/class-use/OverlayListener.html b/org/micromanager/display/overlay/class-use/OverlayListener.html index ddb4fe2..8b111bf 100644 --- a/org/micromanager/display/overlay/class-use/OverlayListener.html +++ b/org/micromanager/display/overlay/class-use/OverlayListener.html @@ -103,25 +103,25 @@

Uses of void -Overlay.addOverlayListener(OverlayListener listener) +AbstractOverlay.addOverlayListener(OverlayListener listener)
Add a listener.
void -AbstractOverlay.addOverlayListener(OverlayListener listener) +Overlay.addOverlayListener(OverlayListener listener)
Add a listener.
void -Overlay.removeOverlayListener(OverlayListener listener) +AbstractOverlay.removeOverlayListener(OverlayListener listener)
Remove a listener.
void -AbstractOverlay.removeOverlayListener(OverlayListener listener) +Overlay.removeOverlayListener(OverlayListener listener)
Remove a listener.
diff --git a/org/micromanager/display/package-tree.html b/org/micromanager/display/package-tree.html index f9d88bd..068394a 100644 --- a/org/micromanager/display/package-tree.html +++ b/org/micromanager/display/package-tree.html @@ -147,8 +147,8 @@

Enum Hierarchy

diff --git a/overview-tree.html b/overview-tree.html index 059efb2..a91ada0 100644 --- a/overview-tree.html +++ b/overview-tree.html @@ -371,8 +371,8 @@

Enum Hierarchy