From a5557afb330d34648d60a0d5f63886ee8c3c8289 Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Mon, 18 Nov 2024 12:56:04 -0600 Subject: [PATCH] test: Add gpu tags to parabricks --- modules/nf-core/parabricks/applybqsr/tests/main.nf.test | 3 ++- modules/nf-core/parabricks/fq2bam/tests/main.nf.test | 3 ++- modules/nf-core/parabricks/fq2bammeth/tests/main.nf.test | 3 ++- 3 files changed, 6 insertions(+), 3 deletions(-) diff --git a/modules/nf-core/parabricks/applybqsr/tests/main.nf.test b/modules/nf-core/parabricks/applybqsr/tests/main.nf.test index c85fd447b3d..9cecef89358 100644 --- a/modules/nf-core/parabricks/applybqsr/tests/main.nf.test +++ b/modules/nf-core/parabricks/applybqsr/tests/main.nf.test @@ -8,6 +8,7 @@ nextflow_process { tag "modules_nfcore" tag "parabricks" tag "parabricks/applybqsr" + tag "gpu" test("sarscov2 - bam - pe") { @@ -210,4 +211,4 @@ nextflow_process { } -} +} \ No newline at end of file diff --git a/modules/nf-core/parabricks/fq2bam/tests/main.nf.test b/modules/nf-core/parabricks/fq2bam/tests/main.nf.test index 8e4adb2966c..c2273e762ba 100644 --- a/modules/nf-core/parabricks/fq2bam/tests/main.nf.test +++ b/modules/nf-core/parabricks/fq2bam/tests/main.nf.test @@ -10,6 +10,7 @@ nextflow_process { tag "parabricks/fq2bam" tag "modules_nfcore" tag "parabricks" + tag "gpu" setup { run("BWA_INDEX") { @@ -171,4 +172,4 @@ nextflow_process { } -} +} \ No newline at end of file diff --git a/modules/nf-core/parabricks/fq2bammeth/tests/main.nf.test b/modules/nf-core/parabricks/fq2bammeth/tests/main.nf.test index 42e436a3ba3..459eb6317db 100644 --- a/modules/nf-core/parabricks/fq2bammeth/tests/main.nf.test +++ b/modules/nf-core/parabricks/fq2bammeth/tests/main.nf.test @@ -10,6 +10,7 @@ nextflow_process { tag "parabricks" tag "parabricks/fq2bammeth" tag "modules_nfcore" + tag "gpu" setup { run("BWAMETH_INDEX") { @@ -119,4 +120,4 @@ nextflow_process { ) } } -} +} \ No newline at end of file