From 72eb1a558f44138cfedbad5144878008d89aa726 Mon Sep 17 00:00:00 2001
From: peterpru <peter.pruisscher@scilifelab.se>
Date: Thu, 9 Jan 2025 15:13:17 +0100
Subject: [PATCH] bump multiqc version

---
 modules.json                                    | 2 +-
 modules/nf-core/multiqc/environment.yml         | 2 +-
 modules/nf-core/multiqc/main.nf                 | 4 ++--
 modules/nf-core/multiqc/tests/main.nf.test.snap | 6 +++---
 4 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/modules.json b/modules.json
index 166ebd63..ad388fcf 100644
--- a/modules.json
+++ b/modules.json
@@ -295,7 +295,7 @@
                     },
                     "multiqc": {
                         "branch": "master",
-                        "git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d",
+                        "git_sha": "f80914f78fb7fa1c00b14cfeb29575ee12240d9c",
                         "installed_by": ["modules"]
                     },
                     "ngsbits/samplegender": {
diff --git a/modules/nf-core/multiqc/environment.yml b/modules/nf-core/multiqc/environment.yml
index 6f5b867b..439a7c22 100644
--- a/modules/nf-core/multiqc/environment.yml
+++ b/modules/nf-core/multiqc/environment.yml
@@ -2,4 +2,4 @@ channels:
   - conda-forge
   - bioconda
 dependencies:
-  - bioconda::multiqc=1.25.1
+  - bioconda::multiqc=1.26
diff --git a/modules/nf-core/multiqc/main.nf b/modules/nf-core/multiqc/main.nf
index cc0643e1..775b3ffd 100644
--- a/modules/nf-core/multiqc/main.nf
+++ b/modules/nf-core/multiqc/main.nf
@@ -3,8 +3,8 @@ process MULTIQC {
 
     conda "${moduleDir}/environment.yml"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/multiqc:1.25.1--pyhdfd78af_0' :
-        'biocontainers/multiqc:1.25.1--pyhdfd78af_0' }"
+        'https://depot.galaxyproject.org/singularity/multiqc:1.26--pyhdfd78af_0' :
+        'biocontainers/multiqc:1.26--pyhdfd78af_0' }"
 
     input:
     path  multiqc_files, stageAs: "?/*"
diff --git a/modules/nf-core/multiqc/tests/main.nf.test.snap b/modules/nf-core/multiqc/tests/main.nf.test.snap
index 2fcbb5ff..ee01208e 100644
--- a/modules/nf-core/multiqc/tests/main.nf.test.snap
+++ b/modules/nf-core/multiqc/tests/main.nf.test.snap
@@ -2,7 +2,7 @@
     "multiqc_versions_single": {
         "content": [
             [
-                "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916"
+                "versions.yml:md5,4cab99fb04e679fd2d72e29eda1b9646"
             ]
         ],
         "meta": {
@@ -17,7 +17,7 @@
                 "multiqc_report.html",
                 "multiqc_data",
                 "multiqc_plots",
-                "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916"
+                "versions.yml:md5,4cab99fb04e679fd2d72e29eda1b9646"
             ]
         ],
         "meta": {
@@ -29,7 +29,7 @@
     "multiqc_versions_config": {
         "content": [
             [
-                "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916"
+                "versions.yml:md5,4cab99fb04e679fd2d72e29eda1b9646"
             ]
         ],
         "meta": {