From 3d32380730d536683e1bb83c336bd55049e8baca Mon Sep 17 00:00:00 2001 From: Aleix Puig <94959119+aleixpuigb@users.noreply.github.com> Date: Mon, 10 Jun 2024 14:57:49 +0100 Subject: [PATCH] Addresses #2360 NTR mural granulosa cell and pre-granulosa cell (#2392) * Addresses #2360 NTR mural granulosa cell and pre-granulosa cell Addresses #2360 NTR mural granulosa cell and pre-granulosa cell * Edit definitions --- src/ontology/cl-edit.owl | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index cbc666fc7..f6782825a 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -3031,6 +3031,8 @@ Declaration(Class(obo:CL_4033062)) Declaration(Class(obo:CL_4033063)) Declaration(Class(obo:CL_4033064)) Declaration(Class(obo:CL_4033065)) +Declaration(Class(obo:CL_4033066)) +Declaration(Class(obo:CL_4033067)) Declaration(Class(obo:CL_4040000)) Declaration(Class(obo:CL_4040001)) Declaration(Class(obo:CL_4040002)) @@ -7640,6 +7642,7 @@ AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0000501 "granulosa cell of o AnnotationAssertion(rdfs:label obo:CL_0000501 "granulosa cell") SubClassOf(obo:CL_0000501 obo:CL_0000174) SubClassOf(obo:CL_0000501 obo:CL_0002174) +SubClassOf(obo:CL_0000501 ObjectSomeValuesFrom(obo:RO_0002207 obo:CL_4033066)) # Class: obo:CL_0000502 (type D enteroendocrine cell) @@ -31947,6 +31950,34 @@ SubClassOf(obo:CL_4033065 obo:CL_0000785) SubClassOf(obo:CL_4033065 ObjectSomeValuesFrom(obo:RO_0002202 obo:CL_0000788)) SubClassOf(obo:CL_4033065 ObjectSomeValuesFrom(obo:RO_0002203 obo:CL_0000980)) +# Class: obo:CL_4033066 (pre-granulosa cell) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:17639032") Annotation(oboInOwl:hasDbXref "PMID:32759216") Annotation(oboInOwl:hasDbXref "PMID:33970370") Annotation(oboInOwl:hasDbXref "PMID:38178246") obo:IAO_0000115 obo:CL_4033066 "A supporting cell that is part of the ovary and differentiates into a granulosa cell. A pre-granulosa cell develops from an early supporting gonadal cell by repressing testis determination, which can then proliferate to form primordial follicles.") +AnnotationAssertion(terms:contributor obo:CL_4033066 ) +AnnotationAssertion(terms:contributor obo:CL_4033066 ) +AnnotationAssertion(terms:date obo:CL_4033066 "2024-06-07T12:04:57Z"^^xsd:dateTime) +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:32759216") oboInOwl:hasExactSynonym obo:CL_4033066 "ovarian pregranulosa cell") +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:17639032") Annotation(oboInOwl:hasDbXref "PMID:32759216") oboInOwl:hasExactSynonym obo:CL_4033066 "pregranulosa cell") +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:32759216") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4033066 "PG cell") +AnnotationAssertion(rdfs:label obo:CL_4033066 "pre-granulosa cell") +SubClassOf(obo:CL_4033066 obo:CL_0000630) +SubClassOf(obo:CL_4033066 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0000992)) +SubClassOf(obo:CL_4033066 ObjectSomeValuesFrom(obo:RO_0002210 obo:CL_0000501)) + +# Class: obo:CL_4033067 (mural granulosa cell) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:27815559") Annotation(oboInOwl:hasDbXref "PMID:33970370") Annotation(oboInOwl:hasDbXref "PMID:34198768") obo:IAO_0000115 obo:CL_4033067 "A follicular cell of ovary that differentiates from a granulosa cell during the secondary follicle stage. Mural granulosa cells line the inner surface of the follicle wall, surrounding the fluid-filled antral cavity. These cells produce oestrogen during the follicular phase in response to follicle-stimulating hormone (FSH), and progesterone after ovulation in response to luteinizing hormone (LH).") +AnnotationAssertion(terms:contributor obo:CL_4033067 ) +AnnotationAssertion(terms:contributor obo:CL_4033067 ) +AnnotationAssertion(terms:date obo:CL_4033067 "2024-06-07T12:15:13Z"^^xsd:dateTime) +AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4033067 "EFO:0005289") +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1530/REP-16-0500") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4033067 "MGC") +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34198768") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4033067 "mural GC") +AnnotationAssertion(rdfs:label obo:CL_4033067 "mural granulosa cell") +SubClassOf(obo:CL_4033067 obo:CL_0002174) +SubClassOf(obo:CL_4033067 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0000992)) +SubClassOf(obo:CL_4033067 ObjectSomeValuesFrom(obo:RO_0002207 obo:CL_0000501)) + # Class: obo:CL_4040000 (glial restricted tripotential precursor cell) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:10719353") obo:IAO_0000115 obo:CL_4040000 "A glial precursor cell that generates oligodendrocytes and type-1 and type-2 astrocytes. It has been shown in some mammals that this cell type may express A2B5, nestin, FGFR-1, FGFR-2, FGFR-3, PLP, and DM-20 antigens. Unlike oligodendrocyte precursor cell, it does not initially express PDGFR-alpha and can differentiate into both type-1 and type-2 astrocytes.")