Repositories list

• pbg-ld

  Public
  Linked Data Platform for Plant Breeding & Genomics

  genomicslinked-datagenome-annotation+ 7traitstriplesqtlsolanaceaeplant-sciencessparqlrdf

  PLpgSQL

  •

  Apache License 2.0

  •5•2•16•0•Updated Nov 30, 2023Nov 30, 2023

• docker-images

  Public
  Dockerized Virtuoso Universal Server (Open Source Edition)

  dockerdocker-imagevirtuoso-universal-server

  Python

  •

  Apache License 2.0

  •0•0•1•0•Updated Feb 22, 2023Feb 22, 2023

• queries

  Public
  SPARQL queries for Web API

  sparqlrest-apigrlc

  Apache License 2.0

  •0•0•2•0•Updated Feb 12, 2021Feb 12, 2021

• manuscript

  Public
  TeX

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Sep 26, 2020Sep 26, 2020

• notebooks

  Public
  Example notebooks to analyze pbg-ld data

  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Sep 2, 2020Sep 2, 2020

• QTM

  Public
  QTLTableMiner++ tool for mining tables in scientific articles

  Java

  •

  Apache License 2.0

  •6•1•0•0•Updated Aug 30, 2020Aug 30, 2020

• siga

  Public
  Semantically Interoperable Genome Annotations

  rdfrdflibgenome-annotation+ 2triplesgff

  Python

  •

  Apache License 2.0

  •2•0•12•0•Updated Sep 3, 2019Sep 3, 2019

• QTL-prioritisation

  Public
  DEPRECATED - Added to https://github.com/candYgene/notebooks

  Jupyter Notebook

  •1•0•0•0•Updated Jun 25, 2019Jun 25, 2019

• grlc

  Public
  grlc builds Web APIs using shared SPARQL queries

  Python

  •

  MIT License

  •32•0•0•0•Updated Jun 24, 2019Jun 24, 2019

• ODEX-FAIRDataPoint

  Public
  Provide machine-readable descriptions of your data assets

  Java

  •

  Apache License 2.0

  •14•0•0•0•Updated Nov 3, 2018Nov 3, 2018

• abg-ld

  Public
  Linked Data Platform for Animal Breeding & Genomics

  databaselinked-datasparql+ 7genome-annotationtriplesqtlvirtuoso-servergenomicsrdfanimal-breeding

  Apache License 2.0

  •0•0•0•0•Updated Mar 29, 2018Mar 29, 2018