diff --git a/EDTA_raw.pl b/EDTA_raw.pl index 904c277..a22a6b9 100755 --- a/EDTA_raw.pl +++ b/EDTA_raw.pl @@ -384,7 +384,7 @@ print STDERR "Species: $species\n"; # run TIR-Learner - `sh $TIR_Learner -g $genome -s $species -t $threads -l $maxint`; + `bash $TIR_Learner -g $genome -s $species -t $threads -l $maxint`; `perl $rename_tirlearner ./TIR-Learner-Result/TIR-Learner_FinalAnn.fa | perl -nle 's/TIR-Learner_//g; print \$_' > $genome.TIR`; # clean raw predictions with flanking alignment