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I find the whole concept of "observed criterion" confusing and unnecessary. What are we trying to describe here? When is the last time anyone in MX applied some individual, per-reflection criteria a la
_pdbx_diffrn_merge_stat.observed_criterion_I_max (The criterion used to classify a reflection as 'observed' expressed as an upper limit for the value of I.)
_pdbx_diffrn_merge_stat.observed_criterion_I_min (The criterion used to classify a reflection as 'observed' expressed as a lower limit for the value of I.)
_pdbx_diffrn_merge_stat.observed_criterion_sigma_I (The criterion used to classify a reflection as 'observed' expressed as a multiple of the value of sigma(I).)
The only place where some programs/users might apply such a criteria could be during refinement itself (or maybe in computing some R-values):.
Unfortunately, the "observed_criterion" is defined in the _reflns category, suggesting that any selection process was done within the reflection data prior to refinement. Of course, multiple selection processes happened during data-collection, but none as simplistic as an I>sig(I) cut-off or a Imax/Imin limit. These selection processes are highly program and processing-step specific (as well as depending on program versions and run-time parameters) and can be very difficult to capture in anything machine readable.
Of course, we could just define those criteria in a way that would catch all reflections in any case. But this would mean that
_pdbx_diffrn_merge_stat.number_obs
_pdbx_diffrn_merge_stat.number_all
would always have the same value ... not sure that is useful here? I would leave any distinction between the _all and _obs quantities out completely and just stick with reflections contributing to this data set.
The text was updated successfully, but these errors were encountered:
I find the whole concept of "observed criterion" confusing and unnecessary. What are we trying to describe here? When is the last time anyone in MX applied some individual, per-reflection criteria a la
The criterion used to classify a reflection as 'observed' expressed as an upper limit for the value of I.
)The criterion used to classify a reflection as 'observed' expressed as a lower limit for the value of I.
)The criterion used to classify a reflection as 'observed' expressed as a multiple of the value of sigma(I).
)The only place where some programs/users might apply such a criteria could be during refinement itself (or maybe in computing some R-values):.
Unfortunately, the "observed_criterion" is defined in the _reflns category, suggesting that any selection process was done within the reflection data prior to refinement. Of course, multiple selection processes happened during data-collection, but none as simplistic as an I>sig(I) cut-off or a Imax/Imin limit. These selection processes are highly program and processing-step specific (as well as depending on program versions and run-time parameters) and can be very difficult to capture in anything machine readable.
Of course, we could just define those criteria in a way that would catch all reflections in any case. But this would mean that
would always have the same value ... not sure that is useful here? I would leave any distinction between the _all and _obs quantities out completely and just stick with
reflections contributing to this data set
.The text was updated successfully, but these errors were encountered: