refs.bib

@thesis{oliveiraesilva1994a,
  author       = {Oliveira e Silva, Tom\'as},
  date         = {1994-04},
  institution  = {University of Aveiro},
  title        = {Sobre os filtros de {{Kautz}} e sua utiliza\c c\~ao na aproxima\c c\~ao de sistemas lineares invariantes no tempo},
  type         = {phdthesis},
  url          = {http://hdl.handle.net/10773/4641},
}

@online{oliveiraesilva2012a,
  author       = {Oliveira e Silva, Tom\'as},
  date         = {2012-05},
  title        = {{{UA}} thesis {{LaTeX}} style file},
  url          = {http://sweet.ua.pt/tos/TeX/ua_thesis.tgz},
}

@thesis{antunes2015a,
  author       = {Antunes, Rui},
  date         = {2015-07},
  institution  = {University of Aveiro},
  title        = {Genomics music},
  type         = {mathesis},
  url          = {http://hdl.handle.net/10773/18866},
}

@inproceedings{antunes2019a,
  author       = {Antunes, Rui and Silva, Jo\~ao Figueira and Pereira, Arnaldo and Matos, S\'ergio},
  booktitle    = {12th {{International Joint Conference}} on {{Biomedical Engineering Systems}} and {{Technologies}}},
  date         = {2019-02},
  pages        = {59--67},
  publisher    = {SciTePress},
  title        = {Rule-based and machine learning hybrid system for patient cohort selection},
  url          = {https://doi.org/10.5220/0007349300590067},
  venue        = {Prague, Czech Republic},
}

@article{antunes2019b,
  author       = {Antunes, Rui and Matos, S\'ergio},
  date         = {2019-10},
  issue        = {baz095},
  journaltitle = {Database},
  note         = {Oxford University Press},
  title        = {Extraction of chemical--protein interactions from the literature using neural networks and narrow instance representation},
  url          = {https://doi.org/10.1093/database/baz095},
  volume       = {2019},
}

@inproceedings{antunes2020a,
  author       = {Antunes, Rui and Silva, Jo\~ao Figueira and Matos, S\'ergio},
  booktitle    = {35th {{Annual ACM Symposium}} on {{Applied Computing}}},
  date         = {2020-03},
  pages        = {662--669},
  publisher    = {ACM},
  title        = {Evaluating semantic textual similarity in clinical sentences using deep learning and sentence embeddings},
  url          = {http://hdl.handle.net/10773/31473},
  venue        = {Online},
}

@inproceedings{almeida2021a,
  author       = {Almeida, Tiago and Antunes, Rui and Silva, Jo\~ao Figueira and Almeida, Jo\~ao Rafael and Matos, S\'ergio},
  booktitle    = {{{BioCreative VII Challenge Evaluation Workshop}}},
  date         = {2021-11},
  pages        = {119--123},
  title        = {Chemical detection and indexing in {{PubMed}} full text articles using deep learning and rule-based methods},
  url          = {https://biocreative.bioinformatics.udel.edu/resources/publications/bc-vii-workshop-proceedings/},
  venue        = {Online},
}