diff --git a/.github/workflows/chebi.yml b/.github/workflows/chebi.yml index 9f803afd..eccea8dd 100644 --- a/.github/workflows/chebi.yml +++ b/.github/workflows/chebi.yml @@ -60,7 +60,7 @@ jobs: inputFile="mapping_preprocessing/datasources/chebi/data/ChEBI_complete_3star.sdf" outputDir="mapping_preprocessing/datasources/chebi/data" java -cp java -cp target/mapping_prerocessing-0.0.1-jar-with-dependencies.jar org.sec2pri.chebi_sdf $inputFile $outputDir - echo "Java preprocessing of ChEBI data is done" + echo "Java preprocessing of ChEBI data is done." diff --git a/.github/workflows/hmdb.yml b/.github/workflows/hmdb.yml index 68d6f7c7..28775a72 100644 --- a/.github/workflows/hmdb.yml +++ b/.github/workflows/hmdb.yml @@ -56,7 +56,7 @@ jobs: # Step 3: create and compare logfile (tba) - name: Compare data size run: | - echo "HMDB data has been succesfully downloaded" + echo "HMDB data has been succesfully downloaded." # Step 4: Commit and push logfile # - name: Commit and Push Logfile diff --git a/.github/workflows/maven.yml b/.github/workflows/maven.yml index ec7e1a17..d963d2ce 100644 --- a/.github/workflows/maven.yml +++ b/.github/workflows/maven.yml @@ -4,7 +4,8 @@ on: push: branches: - main - pull_request: + pull_request: + branches: - main jobs: