Make all fails with No rule to make target...

[juliaphilipp]

No rule to make target 'piranha/src/smithlab_cpp/GenomicRegion.o', needed by `Piranha'. Stop.

This is the whole output
x@compute-0-8 piranha]$ make all
make[1]: Entering directory /campusdata/x/software/piranha/src' make[2]: Entering directory/campusdatax/software/piranha/src/progs'
make[2]: *** No rule to make target /campusdata/x/software/piranha/src/smithlab_cpp/GenomicRegion.o', needed byPiranha'. Stop.
make[2]: Leaving directory /campusdata/x/software/piranha/src/progs' make[1]: *** [all] Error 2 make[1]: Leaving directory/campusdata/x/software/piranha/src'
make: *** [all] Error 2

[andrewdavidsmith]

Hi Julia.

If you are using Piranha from github, you need to make sure you do a recursive clone. Can you confirm you did that? I think this isn’t needed if you use the release (named with tar.gz, or similar).

Andrew

On Oct 28, 2016, at 2:08 PM, Julia Philipp [email protected] wrote:

No rule to make target 'piranha/src/smithlab_cpp/GenomicRegion.o', needed by `Piranha'. Stop.

This is the whole output
x@compute-0-8 piranha]$ make all
make[1]: Entering directory /campusdata/x/software/piranha/src'
make[2]: Entering directory/campusdatax/software/piranha/src/progs'
make[2]: *** No rule to make target /campusdata/x/software/piranha/src/smithlab_cpp/GenomicRegion.o', needed byPiranha'. Stop.
make[2]: Leaving directory /campusdata/x/software/piranha/src/progs'
make[1]: *** [all] Error 2
make[1]: Leaving directory/campusdata/x/software/piranha/src'
make: *** [all] Error 2

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[juliaphilipp]

Hi Andrew,

thank you so much for your help! You're right, I should have just gone with the release. Sorry about that. It is working now

Julia