ORF Annotations

[bshim181]

Hello,

I was wondering if there is a way to further break down ORF annotations presented by the ribotricer algorithm.

I would like to get a sense for proportion of different non-canonical ORF types such as extended, truncated, polycistronic, or internal ORFs.

[saketkc]

While it is currently not supported internally, if you pass it a custom index file following the format of the index file with these annotations, it is doable.