WP4936.md

# WikiPathways WP4936

• WikiPathways: WP4936 (classic)
• Species: Homo sapiens
• Scholia: WP4936
• WPRDF file: wp/Human/WP4936.ttl
• GPMLRDF file: wp/gpml/Human/WP4936.ttl
• SBML file: sbml/WP4936.sbml (SVG) (conversion notes)

Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• CovidDiseaseMapsTests
  • interactionsWithoutReferences: .x we found 1 problem(s):
    • Interactions without literature references: 20
  • missingHGNC: .. all OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBMetabolitesTests: all 1 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 1
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 7 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 13 tests OK!

Summary

• Number of test classes: 22
• Number of tests: 111
• Number of assertions: 224
• Number of fails: 2

Fails

Interactions without references

Interactions without literature references: 20

• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id9545f48f
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id259f64e
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/ide9784478
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/fbe32
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id28c533ea
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/bf121
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id788d6f1c
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id396f48b2
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id8825c1d0
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/db1e2
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/idc3daa4b8
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/f725b
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/ComplexBinding/f7bb6
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id8be830b7
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/ComplexBinding/ddc93
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/id67a2f315
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/da259
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/idd35c42c0
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/ComplexBinding/c5e75
• http://classic.wikipathways.org/instance/WP4936_r129410 -> http://rdf.wikipathways.org/Pathway/WP4936_r129410/WP/Interaction/e048e

More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences

Interactions with Labels

Interactions found that involve Labels: 1

• http://classic.wikipathways.org/instance/WP4936_r129410 "SNAREs" with graphId f13f3

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels