- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- CovidDiseaseMapsTests
- interactionsWithoutReferences: .x we found 1 problem(s):
- missingHGNC: .. all OK!
- DataNodesTests
- dataNodesWithoutIdentifier: .x we found 1 problem(s):
- unknownTypes_knownDatasource: .. all OK!
- unknownTypes: .. all OK!
- unknownTypes_Reactome: .. all OK!
- otherDataSource: .. all OK!
- EnsemblTests: all 5 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 15 tests OK!
- HMDBMetabolitesTests: all 2 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- IEMPathwayTests: all 6 tests OK!
- InteractionTests
- noMetaboliteToNonMetaboliteConversions: .. all OK!
- noNonMetaboliteToMetaboliteConversions: .. all OK!
- noGeneProteinConversions: .. all OK!
- nonNumericIDs: .. all OK!
- interactionsWithLabels: .. all OK!
- possibleTranslocations: .x we found 1 problem(s):
- noProteinProteinConversions: .. all OK!
- incorrectKEGGIdentifiers: .. all OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 15 tests OK!
- OudatedDataSourcesTests: all 24 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 15 tests OK!
- Number of test classes: 23
- Number of tests: 140
- Number of assertions: 281
- Number of fails: 3
Interactions without literature references: 8
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/ComplexBinding/c476b
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/ComplexBinding/efdba
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/WP/Interaction/ida67f7091
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/ComplexBinding/c3f28
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/ComplexBinding/b7dfd
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/WP/Interaction/idf75c1c60
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/WP/Interaction/id9cc40d42
- http://classic.wikipathways.org/instance/WP4018_r135127 -> http://rdf.wikipathways.org/Pathway/WP4018_r135127/WP/Interaction/ide308fea3
More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences
The following DataNodes have no identifier: 8
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/dc837 (AMPK)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/e2cf4 (Cell proliferation)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/ca20e (H2)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/fc670 (H2)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/ab0a6 (H3)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/e2943 (H3)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/ce0d9 (PI3K)
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/DataNode/e9ef2 (RTK)
More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier
Interactions between identical nodes: 1
- http://classic.wikipathways.org/instance/WP4018_r135127 http://rdf.wikipathways.org/Pathway/WP4018_r135127/WP/Interaction/idf75c1c60 "HIF1B" (https://identifiers.org/ensembl/ENSG00000143437) and HIF1B" (https://identifiers.org/ensembl/ENSG00000143437)
More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations