- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- CovidDiseaseMapsTests
- interactionsWithoutReferences: .x we found 1 problem(s):
- missingHGNC: .. all OK!
- DataNodesTests: all 5 tests OK!
- EnsemblTests: all 5 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 15 tests OK!
- HMDBMetabolitesTests: all 2 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- IEMPathwayTests: all 6 tests OK!
- InteractionTests
- noMetaboliteToNonMetaboliteConversions: .. all OK!
- noNonMetaboliteToMetaboliteConversions: .. all OK!
- noGeneProteinConversions: .. all OK!
- nonNumericIDs: .. all OK!
- interactionsWithLabels: .x we found 1 problem(s):
- possibleTranslocations: .. all OK!
- noProteinProteinConversions: .. all OK!
- incorrectKEGGIdentifiers: .. all OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests
- metaboliteAlsoOtherType: .. all OK!
- casNumbersNotMarkedAsMetabolite: .. all OK!
- chemspiderIDsNotMarkedAsMetabolite: .. all OK!
- HMDBIDsNotMarkedAsMetabolite: .. all OK!
- KEGGIDsNotMarkedAsMetabolite: .. all OK!
- metabolitesWithAnEnsembleID: .. all OK!
- metabolitesWithAnEntrezGeneID: .. all OK!
- metabolitesWithDbButNoIdentifier: .. all OK!
- metabolitesWithIdentifierButNoDb: .. all OK!
- ChEBIIDsNotMarkedAsMetabolite: .. all OK!
- PubChemIDsNotMarkedAsMetabolite: .. all OK!
- PubChemSubstanceIDsNotMarkedAsMetabolite: .. all OK!
- PubChemIDsNotNumbers: .. all OK!
- PubChemSubstanceIDsNotNumbers: .. all OK!
- tooManyInChIKeys: .x we found 1 problem(s):
- OudatedDataSourcesTests: all 24 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests
- keggWithoutMapping: .. all OK!
- pubchemCIDWithoutMapping: .. all OK!
- hmdbWithoutMapping: .. all OK!
- casWithoutMapping: .. all OK!
- wikDataTypo: .. all OK!
- duplicateWikidataMappings: .. all OK!
- wikidataIdentifiersWrong: .. all OK!
- chemspiderCIDWithoutMapping: .. all OK!
- lipidMapsWithoutMapping: .. all OK!
- kNApSAcKWithoutMapping: .. all OK!
- replaceWikipedia: .. all OK!
- chebiWithoutMapping_Reactome: .. all OK!
- chebiWithoutMapping: .. all OK!
- inchikeyWithoutMapping: .x we found 1 problem(s):
- retiredIdentifiers: .. all OK!
- Number of test classes: 23
- Number of tests: 140
- Number of assertions: 281
- Number of fails: 4
Interactions without literature references: 11
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idc3f9ca71
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idf02016cf
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/fca0e
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/ebf19
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idbf91fee3
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/e4a6c
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idcb736366
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/afd58
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idfe78d24b
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idb83ec8f6
- http://classic.wikipathways.org/instance/WP5506_r136162 -> http://rdf.wikipathways.org/Pathway/WP5506_r136162/WP/Interaction/idfd836518
More details at https://www.wikipathways.org/WikiPathwaysCurator/CovidDiseaseMapsTests/interactionsWithoutReferences
Interactions found that involve Labels: 3
- http://classic.wikipathways.org/instance/WP5506_r136162 "NAD synthetase 1 deficiency" with graphId d7a82
- http://classic.wikipathways.org/instance/WP5506_r136162 "NAD(P)HX epimerase deficiency" with graphId cf0ea
- http://classic.wikipathways.org/instance/WP5506_r136162 "NAD(P)HX dehydratase deficiency" with graphId f7ea7
More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels
Non-zero count of metabolites with more than one InChIKey: 1
- http://classic.wikipathways.org/instance/WP5506_r136162 has: ADP-D-ribose (CHEBI:16960) with InChIKeys:
SRNWOUGRCWSEMX-UHFFFAOYSA-N, SRNWOUGRCWSEMX-TYASJMOZSA-N
More details at https://www.wikipathways.org/WikiPathwaysCurator/MetabolitesTests/tooManyInChIKeys
InChIKey identifiers without Wikidata mappings: 1
XHATZBPBVXWMQQ-GGFUHNOESA-N cyclo-NADHX