spack.yaml: depend on generic tracers Spack components #86

harshula · 2024-11-15T01:35:07Z

Testing new infrastructure
Original PR: #82

🚀 The latest prerelease access-om2/pr86-19 at 8239b13 is here: #86 (comment) 🚀

github-actions · 2024-11-15T01:43:01Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-1 with commit b4e6338

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-1 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-1

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages development, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version development
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

aidanheerdegen · 2024-11-15T07:19:53Z

$ module use /g/data/vk83/prerelease/modules
$ module load access-om2/pr86-1
Loading access-om2/pr86-1
  Loading requirement: oasis3-mct/2023.11.09-uymfvj3 libaccessom2/2023.10.26-l6hmysz cice5/2023.10.19-epnbkes mom5/dev_2024.08.14-nj74pgj

Awesome!

github-actions · 2024-11-18T05:14:14Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-1 with commit 3aae54e

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-1 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-1

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.0, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.0
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

harshula · 2024-11-18T05:18:29Z

Hi @CodeGat , Same prerelease name for both deployments.

github-actions · 2024-11-18T22:50:32Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-9 with commit 50ddbcc

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-9 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-9

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages development, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version development
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

access-hive-bot · 2024-11-19T04:23:28Z

This pull request has been mentioned on ACCESS Hive Community Forum. There might be relevant details there:

https://forum.access-hive.org.au/t/csiro-access-nri-standup-minutes/3789/6

github-actions · 2024-11-19T07:39:47Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-10 with commit fcf18a3

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-10 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-10

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages development, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version development
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

github-actions · 2024-11-19T23:55:22Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-11 with commit fab81c8

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-11 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-11

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.0, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.0
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

harshula · 2024-11-20T02:16:01Z

NOTE

Module access-om2/pr86-10 does not contain Spack-based generic tracer support:

$ spack find --variants --long mom5 | grep eaa3
eaa3kwy [email protected]_2024.08.14=2024.08.14~access-gtracers~deterministic~optimisation_report+restart_repro build_system=makefile type=ACCESS-OM

Module access-om2/pr86-11 does:

$ spack find --variants --long mom5 | grep nj74pg
nj74pgj [email protected]_2024.08.14=2024.08.14+access-gtracers~deterministic~optimisation_report+restart_repro build_system=makefile type=ACCESS-OM

github-actions · 2024-11-21T05:45:21Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-12 with commit 706182c

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-12 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-12

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.1, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.1
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

github-actions · 2024-11-25T01:44:59Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-13 with commit 8383e78

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-13 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-13

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.2, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.2
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

github-actions · 2024-11-26T00:17:58Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-14 with commit a2f87e8

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-14 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-14

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.2, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.2
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

github-actions · 2024-11-26T00:23:49Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86-15 with commit e8c9ad3

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86-15 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-15

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.2, spack-config 2024.11.11

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.2
access-nri/spack-config version 2024.11.11

If this is not what was expected, commit changes to config/versions.json.

CodeGat · 2024-12-10T04:02:54Z

Hey, due to ACCESS-NRI/build-cd#173 we have had to update the infrastructure in this repository, as well - see #90.

We try and keep these kinds of updates to a minimum, and, starting from this one onwards, it will no longer be a hard requirement to update PR branches to incorporate infrastructure changes in order for the infrastructure to work - as you need to for this one.

To update this PR to the new origin/main, do the following:

git pull
git rebase origin/main
git push --force

to incorporate CI changes into the PR.

Your PR may redeploy, but that is okay - it should be identical to the last deployment. Let me know if you have any questions or issues.

github-actions · 2024-12-10T04:10:28Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86- with commit 05d5e7c

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86- as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr86- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.2, spack-config 2024.11.27

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.2
access-nri/spack-config version 2024.11.27

If this is not what was expected, commit changes to config/versions.json.

CodeGat · 2024-12-10T04:15:25Z

!redeploy

github-actions · 2024-12-10T04:16:16Z

🚀 Deploying access-om2 2024.11.0 as prerelease pr86- with commit 05d5e7c

Details and usage instructions

This access-om2 model will be deployed as:

2024.11.0 as a Release (when merged).
pr86- as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr86- environment.

🛠️ Using: spack 0.22, spack-packages 2024.11.2, spack-config 2024.11.27

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.11.2
access-nri/spack-config version 2024.11.27

If this is not what was expected, commit changes to config/versions.json.

* Use tag dev_2024.08.14 instead of branch name * Set config to: "spack": "0.22", "spack-packages": "development",

github-actions · 2024-12-13T00:09:36Z

🚀 Deploying access-om2 2024.12.0 as prerelease pr86-18 with commit ae9c4f4

Details and usage instructions

This access-om2 model will be deployed as:

2024.12.0 as a Release (when merged).
pr86-18 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-18

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr86-18 environment.

🛠️ Using: spack 0.22, spack-packages 2024.12.1, spack-config 2024.11.27

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.12.1
access-nri/spack-config version 2024.11.27

If this is not what was expected, commit changes to config/versions.json.

harshula · 2024-12-15T09:30:15Z

[Updated 15/12/2024: Provided link to deployment comment and provided more details]

Hi @dougiesquire , @pearseb and @chrisb13 ,

If you want to test Spack-built ACCESS-OM2, with componentized generic-tracers, containing wombatlite-sinking, it's here:
#86 (comment)

Verified:

$ spack env activate access-om2-pr86-18
$ spack find --path [email protected]_2024.12.0=2024.12.0
==> In environment access-om2-pr86-18
==> 1 root specs
[+] access-om2

==> Installed packages
-- linux-rocky8-x86_64 / [email protected] -----------------------
[email protected]_2024.12.0=2024.12.0  /g/data/vk83/prerelease/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/access-generic-tracers-git.dev_2024.12.0_2024.12.0-kjyflqiymfteq4g6btxjxcpn5fra6zlo
==> 1 installed package

$ git diff main..wombatlite-sinking

+          print*, "Error: Ecosystem model is not conserving nitrogen"
...
+          print*, "Error: Ecosystem model is not conserving carbon"

$ strings /[...]/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/access-generic-tracers-git.dev_2024.12.0_2024.12.0-kjyflqiymfteq4g6btxjxcpn5fra6zlo/lib64/libgtracers.a | grep -i Ecosystem
Error: Ecosystem model is not conserving nitrogen
Error: Ecosystem model is not conserving carbon

pearseb · 2024-12-15T10:05:25Z

What does this mean?

harshula · 2024-12-15T12:12:51Z

What does this mean?

Use Pre-release pr86-18 if someone wants to test Spack-built ACCESS-OM2, with componentized generic-tracers, containing wombatlite-sinking.

* Includes ACCESS-NRI/GFDL-generic-tracers@991e993

github-actions · 2024-12-17T01:13:15Z

🚀 Deploying access-om2 2024.12.2 as prerelease pr86-19 with commit 8239b13

Details and usage instructions

This access-om2 model will be deployed as:

2024.12.2 as a Release (when merged).
pr86-19 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr86-19

where the binaries shall be on your $PATH.
This Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr86-19 environment.

🛠️ Using: spack 0.22, spack-packages 2024.12.1, spack-config 2024.11.27

Details

It will be deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2024.12.1
access-nri/spack-config version 2024.11.27

If this is not what was expected, commit changes to config/versions.json.

harshula · 2024-12-17T01:33:56Z

Hi @pearseb , Your latest changes should be in the following ACCESS-OM2 deployment: #86 (comment)

harshula self-assigned this Nov 15, 2024

harshula requested a review from CodeGat November 15, 2024 01:35

harshula force-pushed the componentize-generic-tracers branch from 1789855 to b4e6338 Compare November 15, 2024 01:42

harshula temporarily deployed to Gadi Prerelease November 15, 2024 01:43 — with GitHub Actions Inactive

CodeGat removed their request for review November 15, 2024 04:18

harshula temporarily deployed to Gadi Prerelease November 18, 2024 05:14 — with GitHub Actions Inactive

harshula temporarily deployed to Gadi Prerelease November 18, 2024 22:50 — with GitHub Actions Inactive

harshula force-pushed the componentize-generic-tracers branch from b4e6338 to fcf18a3 Compare November 19, 2024 07:39

harshula temporarily deployed to Gadi Prerelease November 19, 2024 07:39 — with GitHub Actions Inactive

harshula temporarily deployed to Gadi Prerelease November 19, 2024 23:55 — with GitHub Actions Inactive

harshula force-pushed the componentize-generic-tracers branch from fab81c8 to 706182c Compare November 21, 2024 05:44

harshula temporarily deployed to Gadi Prerelease November 21, 2024 05:45 — with GitHub Actions Inactive

CodeGat mentioned this pull request Nov 21, 2024

Update PR Description with Prerelease Link ACCESS-NRI/build-cd#172

Merged

harshula force-pushed the componentize-generic-tracers branch from 706182c to 8383e78 Compare November 25, 2024 01:44

harshula temporarily deployed to Gadi Prerelease November 25, 2024 01:45 — with GitHub Actions Inactive

harshula had a problem deploying to Gadi Prerelease November 26, 2024 00:18 — with GitHub Actions Failure

harshula force-pushed the componentize-generic-tracers branch from a2f87e8 to e8c9ad3 Compare November 26, 2024 00:23

harshula temporarily deployed to Gadi Prerelease November 26, 2024 00:23 — with GitHub Actions Inactive

harshula force-pushed the componentize-generic-tracers branch from e8c9ad3 to 05d5e7c Compare December 10, 2024 04:09

harshula temporarily deployed to Gadi Prerelease December 10, 2024 04:10 — with GitHub Actions Inactive

harshula added 4 commits December 13, 2024 10:13

spack.yaml: depend on generic tracers Spack components

dbd9169

* Use tag dev_2024.08.14 instead of branch name * Set config to: "spack": "0.22", "spack-packages": "development",

Use the latest spack-packages tag from the main branch

e3b7682

spack.yaml: access-generic-tracers should use tag 2024.11.0

2f45978

spack.yaml: update the versions of components

ae9c4f4

harshula force-pushed the componentize-generic-tracers branch from 05d5e7c to ae9c4f4 Compare December 13, 2024 00:08

harshula temporarily deployed to Gadi Prerelease December 13, 2024 00:09 — with GitHub Actions Inactive

Build OM2 with wombatlite-sinking (991e993)

8239b13

* Includes ACCESS-NRI/GFDL-generic-tracers@991e993

harshula deployed to Gadi Prerelease December 17, 2024 01:13 — with GitHub Actions Active

harshula marked this pull request as draft December 17, 2024 03:29

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

spack.yaml: depend on generic tracers Spack components #86

spack.yaml: depend on generic tracers Spack components #86

harshula commented Nov 15, 2024 •

edited by github-actions bot

Loading

github-actions bot commented Nov 15, 2024

aidanheerdegen commented Nov 15, 2024

github-actions bot commented Nov 18, 2024

harshula commented Nov 18, 2024

github-actions bot commented Nov 18, 2024

access-hive-bot commented Nov 19, 2024

github-actions bot commented Nov 19, 2024

github-actions bot commented Nov 19, 2024

harshula commented Nov 20, 2024

github-actions bot commented Nov 21, 2024

github-actions bot commented Nov 25, 2024

github-actions bot commented Nov 26, 2024

github-actions bot commented Nov 26, 2024

CodeGat commented Dec 10, 2024 •

edited

Loading

github-actions bot commented Dec 10, 2024

CodeGat commented Dec 10, 2024

github-actions bot commented Dec 10, 2024

github-actions bot commented Dec 13, 2024

harshula commented Dec 15, 2024 •

edited

Loading

pearseb commented Dec 15, 2024 via email •

edited by harshula

Loading

harshula commented Dec 15, 2024

github-actions bot commented Dec 17, 2024

harshula commented Dec 17, 2024

spack.yaml: depend on generic tracers Spack components #86

Are you sure you want to change the base?

spack.yaml: depend on generic tracers Spack components #86

Conversation

harshula commented Nov 15, 2024 • edited by github-actions bot Loading

github-actions bot commented Nov 15, 2024

aidanheerdegen commented Nov 15, 2024

github-actions bot commented Nov 18, 2024

harshula commented Nov 18, 2024

github-actions bot commented Nov 18, 2024

access-hive-bot commented Nov 19, 2024

github-actions bot commented Nov 19, 2024

github-actions bot commented Nov 19, 2024

harshula commented Nov 20, 2024

github-actions bot commented Nov 21, 2024

github-actions bot commented Nov 25, 2024

github-actions bot commented Nov 26, 2024

github-actions bot commented Nov 26, 2024

CodeGat commented Dec 10, 2024 • edited Loading

github-actions bot commented Dec 10, 2024

CodeGat commented Dec 10, 2024

github-actions bot commented Dec 10, 2024

github-actions bot commented Dec 13, 2024

harshula commented Dec 15, 2024 • edited Loading

pearseb commented Dec 15, 2024 via email • edited by harshula Loading

harshula commented Dec 15, 2024

github-actions bot commented Dec 17, 2024

harshula commented Dec 17, 2024

harshula commented Nov 15, 2024 •

edited by github-actions bot

Loading

CodeGat commented Dec 10, 2024 •

edited

Loading

harshula commented Dec 15, 2024 •

edited

Loading

pearseb commented Dec 15, 2024 via email •

edited by harshula

Loading