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Data Organization Tool

Description

Tool for the MouseFeatureExtraction project, used to organize the data into the required arborescence.

How to run

After installing the required libraries (via pip install -r requirements.txt), launch the Window.py file.

Parameters

  • Side keyword: keyword contained only in the name of the side view CSV files

  • Ventral keyword: keyword contained only in the name of the ventral view CSV files

  • X name delimiters: Values just before and just after the name of the X in all the file names, used to extract it

Arborescence created

Target folder
    |- Batch 1
    |    |----- Dataset 1
    |    |        |--------- Side view
    |    |        |            |---Mouse 1 run 1 (.csv)
    |    |        |            |---Mouse 1 run 2 (.csv)
    |    |        |            ...
    |    |        |--------- Ventral view
    |    |        |            |---Mouse 1 run 1 (.csv)
    |    |        |            |---Mouse 1 run 2 (.csv)
    |    |        |            ...
    |    |        |--------- Video
    |    |                    |---Mouse 1 run 1 (.csv)
    |    |                    |---Mouse 1 run 2 (.csv)
    |    |                    ...
    |    |
    |    |----- Dataset 2
    |            ...
    |            
    |- Batch 2
        ...

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Organize experimental data in a structured and coherent manner

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