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University of Birmingham
- @BioWilko
Highlights
- Pro
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modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedJan 24, 2025 -
createtaxdb Public
Forked from nf-core/createtaxdbParallelised and automated construction of metagenomic classifier databases of different tools
Nextflow MIT License UpdatedJan 22, 2025 -
fieldbioinformatics Public
Forked from artic-network/fieldbioinformaticsThe ARTIC field bioinformatics pipeline
Python MIT License UpdatedDec 4, 2024 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedNov 21, 2024 -
Clair3 Public
Forked from HKU-BAL/Clair3Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Python UpdatedNov 21, 2024 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedOct 29, 2024 -
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EToKi Public
Forked from NigelDyer/EToKiall methods related to Enterobase
Python GNU General Public License v3.0 UpdatedApr 23, 2024 -
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scylla Public
Forked from artic-network/scyllasingle sample processing
Nextflow GNU General Public License v3.0 UpdatedNov 10, 2023 -
varys Public
Forked from CLIMB-TRE/varysA pika based client package for rabbitMQ for use in CLIMB-tree
Python GNU General Public License v3.0 UpdatedOct 24, 2023 -
roz Public
Forked from CLIMB-TRE/rozCLIMB-TRE S3 ingest solution and officious bureaucrat.
Python UpdatedOct 20, 2023 -
varys-feedstock Public
Forked from conda-forge/varys-feedstockA conda-smithy repository for varys.
BSD 3-Clause "New" or "Revised" License UpdatedSep 7, 2023 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 28, 2023 -
Porechop Public
Forked from rrwick/Porechopadapter trimmer for Oxford Nanopore reads
C++ GNU General Public License v3.0 UpdatedJun 28, 2023 -
primer-schemes Public
Forked from artic-network/primer-schemesPrimer schemes for real-time genome epidemiology
Python Creative Commons Attribution 4.0 International UpdatedJun 14, 2023 -
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map-of-github-data Public
Forked from anvaka/map-of-github-dataThis repository contains tiles and data for the map of github
JavaScript UpdatedMay 16, 2023 -
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datapipe Public
Forked from COG-UK/datapipeNextflow implementation of grapevine
Nextflow GNU General Public License v3.0 UpdatedMar 31, 2023 -
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reticulatus Public
Forked from SamStudio8/reticulatusA snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads
Python MIT License UpdatedJun 1, 2022 -
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ncov2019-artic-nf Public
Forked from jts/ncov2019-artic-nfA Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019