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40 Open 81 Closed
40 Open 81 Closed
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Issues list

Config checker to validate all parameters in the JSONs
#322 opened Jan 10, 2025 by kokbent
beta_coef(self, t) returns incorrect values
#321 opened Jan 10, 2025 by arik-shurygin
Generalize covid initializer process to different INIT_DATE parameters.
#320 opened Jan 10, 2025 by arik-shurygin
strain introduction lists mirror strain enum. enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#319 opened Jan 10, 2025 by arik-shurygin
1
remove side effects from methods enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#318 opened Jan 10, 2025 by arik-shurygin
parrallelize posterior particle loading
#315 opened Jan 7, 2025 by arik-shurygin
changelog and version incrementing enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#314 opened Jan 7, 2025 by arik-shurygin
ensure all docstrings are numpy format enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#313 opened Jan 7, 2025 by arik-shurygin
type hinting on all parts of DynODE enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#312 opened Jan 7, 2025 by arik-shurygin
Expand AbstractDynodeRunner.save_inference_timelines()?
#311 opened Jan 2, 2025 by kokbent
1
@arik-shurygin
Data dictionary for each possible parameter to the model enhancement New feature or request
#291 opened Oct 28, 2024 by arik-shurygin
6
ensure reproducibility and simplify the process of loading old jobs enhancement New feature or request enterprise_practices Governance housekeeping trying to keep projects usable and secure.
#287 opened Oct 24, 2024 by arik-shurygin
Test using cached or pre-heated metric for NUTS sampling to decrease inference time experiment some sort of experiment to better understand a part of the model
#285 opened Oct 22, 2024 by SamuelBrand1
3
Sensitivity analysis for the introduction mechanism experiment some sort of experiment to better understand a part of the model
#283 opened Oct 22, 2024 by SamuelBrand1
Folding IHR into config? enhancement New feature or request
#273 opened Oct 11, 2024 by kokbent
3
create shiny vis portal for immunity visualization of the populations enhancement New feature or request
#269 opened Oct 8, 2024 by arik-shurygin
Calculate pointwise log-likelihoods and LOO elpd at the end of fitting enhancement New feature or request
#266 opened Oct 5, 2024 by kokbent
@kokbent
1
Test SVI for a model where we have NUTS results enhancement New feature or request experiment some sort of experiment to better understand a part of the model
#258 opened Oct 1, 2024 by SamuelBrand1
Ideas to simplify the generative model for variant data enhancement New feature or request experiment some sort of experiment to better understand a part of the model
#252 opened Sep 24, 2024 by SamuelBrand1
7
Prior predictive checking: especially seasonal burden enhancement New feature or request experiment some sort of experiment to better understand a part of the model
#251 opened Sep 24, 2024 by SamuelBrand1
optimize external_i, seasonality, and vaccination_rate functions with jax.jit enhancement New feature or request
#245 opened Aug 28, 2024 by arik-shurygin
2
Using bayeux to organize numpyro models and access features enhancement New feature or request wontfix This will not be worked on
#244 opened Aug 28, 2024 by SamuelBrand1
3
Build a stripped down version of the sampler/solver to see what is reducing our performance if anything experiment some sort of experiment to better understand a part of the model
#231 opened Aug 19, 2024 by arik-shurygin
3
New seasonality function for covid model Covid modelling Issues to discuss covid model(s) experiment some sort of experiment to better understand a part of the model
#227 opened Aug 15, 2024 by SamuelBrand1
2
Get API docs up documentation Improvements or additions to documentation
#217 opened Aug 12, 2024 by arik-shurygin
ProTip! What’s not been updated in a month: updated:<2024-12-10.