v4.2.0: Performance fixes, site curator role #124
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
DIG-1653: S3 credential storage
Remove OPA_SECRET
* allow 'single quote' pr titles * PR trigger
Bumps [requests](https://github.com/psf/requests) from 2.31.0 to 2.32.2. - [Release notes](https://github.com/psf/requests/releases) - [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md) - [Commits](psf/requests@v2.31.0...v2.32.2) --- updated-dependencies: - dependency-name: requests dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
DIG-1635 : Allow ingest to be completed in batches per object
Update katsu_ingest.py
* Update commandline ingest * Update README.md
DIG-1721, DIG-1776, DIG-1777: async htsget ingest
DIG-1407: ingest validates against running katsu
* fix paths being checked * program authz endpoints should warn about default site admin
…119) * make sure that the program auth exists * update clinical json test data * fix mock urls for htsget
Add an endpoint to echo back the user's refresh token.
* update clinical_etl * add auto delete option * update schema path
* update schema path * move rm after exists * catch calledprocesserror
check to make sure the email isn't already in the role
Update ingest README to include site curator and program registration information
OrdiNeu
approved these changes
Oct 4, 2024
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
v4.2.0: Performance fixes, site curator role
Async ingest, MoH v3, site curator role