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Update README.md
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daisieh authored Dec 14, 2023
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Expand Up @@ -7,8 +7,9 @@ Specifically, this code was designed to convert clinical data for the MOHCCN pro
## Using clinical_etl as a package
You can import this module as a package by including the following in your `requirements.txt`:
```
clinical_etl@git+https://github.com/CanDIG/clinical_ETL_code.git@main
clinical_etl@git+https://github.com/CanDIG/clinical_ETL_code.git@stable
```
If you need the latest version, you can replace `stable` with `develop`.

## CSVConvert
Most of the heavy lifting is done in the [`CSVConvert.py`](CSVConvert.py) script. See sections below for setting up the inputs and running the script.
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