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For site-specific manifests, mappings.csv and functions. No data is t…
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description: Mapping of MUHC Melanoma (1st batch) dataset to MOHCCN format for CanDIG | ||
# mapping is the csv file that contains the list of fields and mapping functions | ||
mapping: moh_muhcMelanoma.csv | ||
# the name of the top-level identifier column in the input data | ||
identifier: submitter_donor_id | ||
# a link to the openapi schema | ||
schema: https://raw.githubusercontent.com/CanDIG/katsu/develop/chord_metadata_service/mohpackets/docs/schema.yml | ||
# class of schema for validation: | ||
schema_class: MoHSchema | ||
# a reference date used to calculate date intervals, formatted as a mapping entry for the mapping template | ||
reference_date: earliest_date(donor.date_resolution, donor.date_of_birth) # NEEDS TO BE CHANGED, ONCE DATES ARE REAL. | ||
# one or more files (dataset_functions.py) that implement the mappings | ||
# described in mapping file | ||
functions: | ||
- muhc_mappings |
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