Update numbering

projects/data_cleaning/Project_module_03.md

@@ -3,7 +3,7 @@
 - Create new branch "package-test" (Make sure changes from last module have been merged, and that you start from the main branch)
 - Make sure pytest and pytest-cov are installed
 - 3.1 Installable package
-    - 4.1 Organize the files into folders and add setup.py. Call your package tscleaner.
+    - 3.1.1 Organize the files into folders and add setup.py. Call your package tscleaner.
         - subfolders: tscleaner, scripts, notebooks, tests
         - make init-file in tscleaner with
             - `from .cleaning import SpikeCleaner, FlatPeriodCleaner, OutOfRangeCleaner`
@@ -20,16 +20,16 @@
                 packages=find_packages(),  
                 install_requires=['numpy', 'matplotlib'],  
                 )  
-    - 4.2 Install the package in editable mode.
+    - 3.1.2 Install the package in editable mode.
         - `>pip install -e .`
-    - 4.3 Modify import statements in notebook_A and script main.py and make sure they run.
-    - 4.4 Modify cleaner tools by raising exceptions for invalid inputs.
-    - 4.5 Move the csv file to `/tests/testdata` and update notebook with relative path to the file
+    - 3.1.3 Modify import statements in notebook_A and script main.py and make sure they run.
+    - 3.1.4 Modify cleaner tools by raising exceptions for invalid inputs.
+    - 3.1.5 Move the csv file to `/tests/testdata` and update notebook with relative path to the file
 - 3.2 Pytest
-    - 4.2.1 Write unit tests with pytest in the `/tests` folder. Create an empty init-py file in the folder. Create a file `test_cleaning.py` and create at least five tests that verify that the cleaning tools work as intended
+    - 3.2.1 Write unit tests with pytest in the `/tests` folder. Create an empty init-py file in the folder. Create a file `test_cleaning.py` and create at least five tests that verify that the cleaning tools work as intended
     - [Optional] Consider to make a fixture that reads the csv file and you can read in all tests
-    - 4.2.2 Run the tests from the commandline by writting `>pytest` in the project root (can you also run the tests from VSCode?)
-    - 4.2.3 Assess the test coverage with `>pytest --cov=tscleaner tests`
+    - 3.2.2 Run the tests from the commandline by writting `>pytest` in the project root (can you also run the tests from VSCode?)
+    - 3.2.3 Assess the test coverage with `>pytest --cov=tscleaner tests`
     - Optional: Get coverage as html with `>pytest --cov=tscleaner --cov-report html` (check the index.html in the htmlcov subfolder afterwards)
 - Create pull request in GitHub and "request review" from your reviewers
 - Get feedback, Adjust code until approval, then merge (and delete branch)

projects/data_cleaning/Project_module_04.md

@@ -2,20 +2,20 @@
 
 - Create new branch "action-formatting" (Make sure changes from last module have been merged, and that you start from the main branch)
 - 4.1 Github Action
-    - 5.1.1 Copy the GitHub action "python-app.yml" from the python template https://github.com/DHI/template-python-library to your own library (make sure it sits in the same folder).
-    - 5.1.2 Change all occurrences of "my_library" in the yml file to your package name "tscleaner"
-    - 5.1.3 Comment out the line with "ruff-action" with "#"
-    - 5.1.4 Commit, push and create a pull request; the tests should now run, verify that they all run before you move on
+    - 4.1.1 Copy the GitHub action "python-app.yml" from the python template https://github.com/DHI/template-python-library to your own library (make sure it sits in the same folder).
+    - 4.1.2 Change all occurrences of "my_library" in the yml file to your package name "tscleaner"
+    - 4.1.3 Comment out the line with "ruff-action" with "#"
+    - 4.1.4 Commit, push and create a pull request; the tests should now run, verify that they all run before you move on
 - 4.2 Ruff
-    - 5.2.1 Enable the "ruff-action" be removing the "#" you added above
-    - 5.2.2 Commit and push, your actions will probably fail now - inspect the problems by clicking the red cross (did you also get an email?)
-    - 5.2.3 Install "ruff" on your local machine with mamba/conda/pip
-    - 5.2.4 Navigate to your project root folder and run ruff with "ruff ."
-    - 5.2.5 Add `__all__ = ["SpikeCleaner", "FlatPeriodCleaner", "OutOfRangeCleaner", "plot_timeseries"]` to your `__init__.py` file and fix remaining issues until ruff passes
-    - 5.2.6 Commit, push and verify that you action now succeeds
+    - 4.2.1 Enable the "ruff-action" be removing the "#" you added above
+    - 4.2.2 Commit and push, your actions will probably fail now - inspect the problems by clicking the red cross (did you also get an email?)
+    - 4.2.3 Install "ruff" on your local machine with mamba/conda/pip
+    - 4.2.4 Navigate to your project root folder and run ruff with "ruff ."
+    - 4.2.5 Add `__all__ = ["SpikeCleaner", "FlatPeriodCleaner", "OutOfRangeCleaner", "plot_timeseries"]` to your `__init__.py` file and fix remaining issues until ruff passes
+    - 4.2.6 Commit, push and verify that you action now succeeds
 - 4.3 Black
-    - 5.3.1 Install "black" on your local machine with mamba/conda/pip
-    - 5.3.2 Run black from your project root folder; inspect the differences; commit
+    - 4.3.1 Install "black" on your local machine with mamba/conda/pip
+    - 4.3.2 Run black from your project root folder; inspect the differences; commit
 - 4.4 pyproject.toml
     - Copy the pyproject.toml from the python template https://github.com/DHI/template-python-library (this file will replace your setup.py)
     - Modify to fit your package