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Comment corrections.
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vinjana committed Feb 18, 2019
1 parent adacdb4 commit 42e2b1e
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Showing 2 changed files with 2 additions and 2 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -80,7 +80,7 @@ fi


# Determine the quality score
set +e # The following few lines fail with exit 141 due to unknown reasons is `set -e` is set.
set +e # The following few lines fail with exit 141 due to unknown reasons if `set -e` is set.
if [[ $LENGTH_SEQ_1 -ne 0 ]]; then
qualityScore=$(getFastqAsciiStream "$RAW_SEQ_1" | "$PERL_BINARY" "$TOOL_SEQUENCER_DETECTION")
else
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2 changes: 1 addition & 1 deletion resources/analysisTools/qcPipeline/bashLib.sh
Original file line number Diff line number Diff line change
Expand Up @@ -184,7 +184,7 @@ waitForRegisteredPids_BashSucksVersion() {
jobs
declare -a realPids=$(listPids)
if [[ -v realPids && ${#realPids[@]} -gt 0 ]]; then
# TODO Make this a look and report the exact pid that failed (or the key, after switching from array to dictionary).
# TODO Make this a loop and report the exact pid that failed (or the key, after switching from array to dictionary).
wait ${realPids[@]}
declare EXIT_CODE=$?
if [[ ${EXIT_CODE} -ne 0 ]]; then
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