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Merge branch 'main' into scene-and-orbit-tests
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caitlinadams committed Jan 9, 2025
2 parents f905c13 + 42e2e33 commit 1e8defe
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28 changes: 28 additions & 0 deletions .github/workflows/run-pytest.yml
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name: Run Tests with Pytest

on:
pull_request:
branches: [main]

jobs:
run-tests:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up micromamba environment
uses: mamba-org/[email protected]
with:
generate-run-shell: true
environment-file: environment.yml
condarc: |
channels:
- conda-forge
- name: Check packages
shell: micromamba-shell {0}
run: |
python --version
pytest --version
- name: Run tests
shell: micromamba-shell {0}
run: |
pytest
295 changes: 60 additions & 235 deletions environment.yml
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@@ -1,265 +1,90 @@
name: sar-antarctica
channels:
- conda-forge
- defaults
dependencies:
- affine=2.4.0
- appnope=0.1.4
- argon2-cffi=23.1.0
- argon2-cffi-bindings=21.2.0
- arrow=1.3.0
- asttokens=2.4.1
- attrs=23.2.0
- aws-c-auth=0.7.22
- aws-c-cal=0.6.15
- aws-c-common=0.9.19
- aws-c-compression=0.2.18
- aws-c-event-stream=0.4.2
- aws-c-http=0.8.2
- aws-c-io=0.14.9
- aws-c-mqtt=0.10.4
- aws-c-s3=0.5.10
- aws-c-sdkutils=0.1.16
- aws-checksums=0.1.18
- aws-crt-cpp=0.26.12
- aws-sdk-cpp=1.11.329
- azure-core-cpp=1.12.0
- azure-identity-cpp=1.8.0
- azure-storage-blobs-cpp=12.11.0
- azure-storage-common-cpp=12.6.0
- babel=2.14.0
- bcrypt=4.1.3
- _libgcc_mutex=0.1
- _openmp_mutex=4.5
- aom=3.9.1
- blosc=1.21.6
- brotli=1.1.0
- brotli-bin=1.1.0
- brotli-python=1.1.0
- bzip2=1.0.8
- c-ares=1.28.1
- ca-certificates=2024.6.2
- cairo=1.18.0
- certifi=2024.6.2
- cffi=1.16.0
- cfitsio=4.4.0
- charset-normalizer=3.3.2
- click=8.1.7
- click-plugins=1.1.1
- cligj=0.7.2
- colour=0.1.5
- comm=0.2.2
- contourpy=1.2.1
- cryptography=42.0.8
- cycler=0.12.1
- debugpy=1.8.1
- decorator=5.1.1
- dill=0.3.8
- exceptiongroup=1.2.0
- executing=2.0.1
- expat=2.6.2
- fmt=10.2.1
- font-ttf-dejavu-sans-mono=2.37
- font-ttf-inconsolata=3.000
- font-ttf-source-code-pro=2.038
- font-ttf-ubuntu=0.83
- fontconfig=2.14.2
- fonts-conda-ecosystem=1
- fonts-conda-forge=1
- fonttools=4.53.0
- freetype=2.12.1
- c-ares=1.34.4
- ca-certificates=2024.12.14
- dav1d=1.2.1
- freexl=2.0.0
- furl=2.1.3
- gdal=3.9.0
- geoalchemy2=0.13.3
- geos=3.12.1
- gdal=3.10.0
- geos=3.13.0
- geotiff=1.7.3
- giflib=5.2.2
- greenlet=3.0.3
- hdf4=4.2.15
- hdf5=1.14.3
- icu=73.2
- idna=3.7
- importlib-metadata=7.2.1
- importlib_metadata=7.2.1
- infinity=1.5
- intervals=0.9.2
- ipykernel=6.29.4
- ipython=8.25.0
- jedi=0.19.1
- json-c=0.17
- jupyter=1.1.1
- jupyter_client=8.6.2
- jupyter_core=5.7.2
- kealib=1.5.3
- kiwisolver=1.4.5
- krb5=1.21.2
- lcms2=2.16
- icu=75.1
- json-c=0.18
- keyutils=1.6.1
- krb5=1.21.3
- ld_impl_linux-64=2.43
- lerc=4.0.0
- libabseil=20240116.2
- libaec=1.1.3
- libarchive=3.7.4
- libarchive=3.7.7
- libavif16=1.1.1
- libblas=3.9.0
- libboost-headers=1.85.0
- libbrotlicommon=1.1.0
- libbrotlidec=1.1.0
- libbrotlienc=1.1.0
- libcblas=3.9.0
- libcrc32c=1.1.2
- libcurl=8.8.0
- libcxx=17.0.6
- libdeflate=1.20
- libedit=3.1.20191231
- libcurl=8.11.1
- libde265=1.0.15
- libdeflate=1.23
- libedit=3.1.20240808
- libev=4.33
- libexpat=2.6.2
- libexpat=2.6.4
- libffi=3.4.2
- libgdal=3.9.0
- libgfortran5=13.2.0
- libglib=2.80.2
- libgoogle-cloud=2.25.0
- libgoogle-cloud-storage=2.25.0
- libgrpc=1.62.2
- libgcc=14.2.0
- libgcc-ng=14.2.0
- libgdal-core=3.10.0
- libgfortran=14.2.0
- libgfortran5=14.2.0
- libgomp=14.2.0
- libheif=1.19.5
- libiconv=1.17
- libjpeg-turbo=3.0.0
- libkml=1.3.0
- liblapack=3.9.0
- libnetcdf=4.9.2
- libnghttp2=1.58.0
- libopenblas=0.3.27
- libpng=1.6.43
- libpq=16.3
- libprotobuf=4.25.3
- libre2-11=2023.09.01
- liblzma=5.6.3
- libnghttp2=1.64.0
- libnsl=2.0.1
- libopenblas=0.3.28
- libpng=1.6.45
- librttopo=1.1.0
- libsodium=1.0.18
- libspatialite=5.1.0
- libsqlite=3.46.0
- libssh2=1.11.0
- libtiff=4.6.0
- libwebp-base=1.4.0
- libxcb=1.16
- libxml2=2.12.7
- libxslt=1.1.39
- libzip=1.10.1
- libsqlite=3.47.2
- libssh2=1.11.1
- libstdcxx=14.2.0
- libstdcxx-ng=14.2.0
- libtiff=4.7.0
- libuuid=2.38.1
- libwebp-base=1.5.0
- libxcrypt=4.4.36
- libxml2=2.13.5
- libzlib=1.3.1
- llvm-openmp=18.1.8
- lxml=5.2.2
- lz4-c=1.9.4
- lz4-c=1.10.0
- lzo=2.10
- matplotlib-base=3.8.4
- matplotlib-inline=0.1.7
- minizip=4.0.7
- multiprocess=0.70.16
- munkres=1.1.4
- ncurses=6.5
- nest-asyncio=1.6.0
- nspr=4.35
- nss=3.101
- numpy=1.26.4
- openjpeg=2.5.2
- openssl=3.3.1
- orderedmultidict=1.0.1
- packaging=24.1
- parso=0.8.4
- passlib=1.7.4
- pathos=0.3.2
- pcre2=10.43
- pendulum=3.0.0
- pexpect=4.9.0
- phonenumbers=8.13.39
- pickleshare=0.7.5
- pillow=10.3.0
- pip=24.0
- platformdirs=4.2.2
- poppler=24.04.0
- poppler-data=0.4.12
- postgresql=16.3
- pox=0.3.4
- ppft=1.7.6.8
- progressbar2=4.4.2
- proj=9.4.1
- prompt-toolkit=3.0.47
- psutil=6.0.0
- psycopg2=2.9.9
- pthread-stubs=0.4
- ptyprocess=0.7.0
- pure_eval=0.2.2
- pycparser=2.22
- pygments=2.18.0
- pyparsing=3.1.2
- pyrosar=0.23.0
- pysocks=1.7.1
- python=3.10.14
- python-dateutil=2.9.0
- python-utils=3.8.2
- numpy=2.2.1
- openssl=3.4.0
- pcre2=10.44
- pip=24.3.1
- proj=9.5.1
- python=3.10.16
- python_abi=3.10
- pytz=2024.1
- pyyaml=6.0.1
- pyzmq=26.0.3
- rasterio=1.3.10
- re2=2023.09.01
- rav1e=0.6.6
- readline=8.2
- requests=2.32.3
- setuptools=70.1.0
- setuptools-scm=8.1.0
- setuptools_scm=8.1.0
- six=1.16.0
- snappy=1.2.0
- snuggs=1.4.7
- spatialist=0.13.1
- spdlog=1.13.0
- sqlalchemy=1.4.49
- sqlalchemy-utils=0.41.2
- sqlalchemy-utils-arrow=0.41.2
- sqlalchemy-utils-babel=0.41.2
- sqlalchemy-utils-base=0.41.2
- sqlalchemy-utils-color=0.41.2
- sqlalchemy-utils-encrypted=0.41.2
- sqlalchemy-utils-intervals=0.41.2
- sqlalchemy-utils-password=0.41.2
- sqlalchemy-utils-pendulum=0.41.2
- sqlalchemy-utils-phone=0.41.2
- sqlalchemy-utils-timezone=0.41.2
- sqlalchemy-utils-url=0.41.2
- sqlite=3.46.0
- stack_data=0.6.2
- tblib=3.0.0
- tiledb=2.24.1
- time-machine=2.14.1
- setuptools=75.6.0
- shapely=2.0.6
- snappy=1.2.1
- sqlite=3.47.2
- svt-av1=2.3.0
- tk=8.6.13
- tomli=2.0.1
- tornado=6.4.1
- traitlets=5.14.3
- types-python-dateutil=2.9.0.20240316
- typing-extensions=4.12.2
- typing_extensions=4.12.2
- tzcode=2024a
- tzdata=2024a
- unicodedata2=15.1.0
- tzdata=2024b
- uriparser=0.9.8
- urllib3=2.2.2
- wcwidth=0.2.13
- wheel=0.43.0
- wheel=0.45.1
- x265=3.5
- xerces-c=3.2.5
- xorg-libxau=1.0.11
- xorg-libxdmcp=1.1.3
- xz=5.2.6
- yaml=0.2.5
- zeromq=4.3.5
- zipp=3.19.2
- zlib=1.3.1
- zstd=1.5.6
- pip:
- asf-search==7.1.3
- boto3==1.34.132
- botocore==1.34.132
- ciso8601==2.3.1
- dateparser==1.2.0
- git+https://github.com/abradley60/dem-stitcher.git@dem_fill
- jmespath==1.0.1
- pyproj==3.6.1
- regex==2024.5.15
- s3transfer==0.10.2
- scipy==1.14.0
- sentineleof==0.9.5
- shapely==2.0.4
- tenacity==8.2.2
- tzlocal==5.2

- click==8.1.8
- pytest==8.3.4
- .

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