Merge pull request #56 from Jumitti/beta

Fix email export
Jumitti · Apr 26, 2024 · f9d5267 · f9d5267
2 parents 466bb5b + c89048f
commit f9d5267
Showing 1 changed file with 2 additions and 11 deletions.
diff --git a/navigation/aio.py b/navigation/aio.py
@@ -65,11 +65,7 @@ def email(excel_file, csv_file, txt_output, email_receiver, body, jaspar):
                                   filename=f'Results_TFinder_{current_date_time}.csv')
         msg.attach(attachment_csv)
 
-        if jaspar == 'PWM':
-            if matrix_type == 'With FASTA sequences':
-                image = MIMEImage(st.session_state['weblogo'].read(), name=f'LOGOMAKER_{current_date_time}.jpg')
-                msg.attach(image)
-        elif jaspar == 'Individual Motif':
+        if jaspar == 'PWM' or jaspar == 'Individual Motif':
             image = MIMEImage(st.session_state['weblogo'].read(), name=f'LOGOMAKER_{current_date_time}.jpg')
             msg.attach(image)
 
@@ -212,16 +208,11 @@ def aio_page():
             st.session_state['upstream'] = upstream
             downstream = int(downstream_entry)
 
-            if 'button_clicked' not in st.session_state:
-                st.session_state.button_clicked = False
-
             # Run Promoter Finder
             if st.button(f"🧬 :blue[**Step 1.5**] Extract {prom_term}", help='(~5sec/gene)'):
                 with st.spinner('Please wait...'):
                     with colprom1:
 
-                        st.session_state.button_clicked = True
-
                         pbar = st.progress(0,
                                            text='**:blue[Extract sequence...] ⚠️:red[PLEASE WAIT UNTIL END WITHOUT CHANGING ANYTHING]**')
                         for i, gene_id in enumerate(gene_ids):
@@ -783,7 +774,7 @@ def aio_page():
                     if st.button("Send ✉"):
                         if jaspar == 'PWM':
                             if matrix_type == 'With PWM':
-                                body = f"Hello 🧬\n\nResults obtained with TFinder.\n\nPosition Weight Matrix:\n{matrix_text}\n\nThis email also includes the sequences used in FASTA format and an Excel table of results.\n\nFor all requests/information, please refer to the 'Contact' tab on the TFinder website. We would be happy to answer all your questions.\n\nBest regards\nTFinder Team 🔎🧬"
+                                body = f"Hello 🧬\n\nResults obtained with TFinder.\n\nPosition Weight Matrix:\n{matrix_str}\n\nThis email also includes the sequences used in FASTA format and an Excel table of results.\n\nFor all requests/information, please refer to the 'Contact' tab on the TFinder website. We would be happy to answer all your questions.\n\nBest regards\nTFinder Team 🔎🧬"
                             if matrix_type == 'With FASTA sequences':
                                 body = f"Hello 🧬\n\nResults obtained with TFinder.\n\nResponsive Elements:\n{individual_motif}\n\nPosition Weight Matrix:\n{matrix_text}\n\nThis email also includes the sequences used in FASTA format and an Excel table of results.\n\nFor all requests/information, please refer to the 'Contact' tab on the TFinder website. We would be happy to answer all your questions.\n\nBest regards\nTFinder Team 🔎🧬"
                         elif jaspar == 'JASPAR_ID':