Adds checks on each job

.github/workflows/build-test-wheel.yml

@@ -14,25 +14,69 @@ jobs:
         tests: [fulltests, unittests/D+C, unittests/D_mols, unittests/D_only, unittests/slab_D_only]
     steps:
     - uses: actions/checkout@v4
+
+    - name: Set UBUNTU tags env variables.
+      if: matrix.os == 'ubuntu-latest'
+      run: |
+          # Set "checking" variable to false by default.
+          echo "has_tags=false" >> $GITHUB_ENV
+          # Get your last commit message, not the merge commit.
+          text=$(git log -1 --no-merges --pretty=%B)
+          # Read the commit message into an array split by "#".
+          readarray -d "#" -t commit_message <<< "$text"
+          # Sanity check.
+          echo "the tags are: ${commit_message[1]}"
+          # Add tags and overwrite "checking" variable to true if there are tags.
+          if [[ "${commit_message[1]}" == *"@"*  ]]; then
+            echo "spec_tags=${commit_message[1]}" >> $GITHUB_ENV
+          fi
+
+    - name: Set macOS tags env variables.
+      if: (matrix.os == 'macos-13') || (matrix.os == 'macos-14')
+      run: |
+
+          # Set "checking" variable to false by default.
+          echo "has_tags=false" >> $GITHUB_ENV
+          # Get your last commit message, not the merge commit.
+          text=$(git log -1 --no-merges --pretty=%B)
+          # Read the commit message into an array split by "#".
+          echo $(echo $text|tr -d '\n')
+          commit_args=${text#*#}
+          # Sanity check.
+          echo "the tags are: ${commit_message[1]}"
+          # Add tags and overwrite "checking" variable to true if there are tags.
+          if [[ "${commit_args}" == *"@"*  ]]; then
+            echo "spec_tags=${commit_args}" >> $GITHUB_ENV
+          fi
+
     - name: Set up Python ${{ matrix.python-version }}
+      if: ${{ ! contains(env.spec_tags, '@notest') }}
       uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
+
     - name: Install pip dependencies
+      if: ${{ ! contains(env.spec_tags, '@notest') }}
       run: |
         python -m pip install --upgrade pip
         python -m pip install forthon>=0.10.7 numpy==1.26.4 h5py
         python -m pip install flake8
         python -m pip install pytest-isolate pytest-xdist
+
     - name: Build UEDGE
+      if: ${{ ! contains(env.spec_tags, '@notest') }}
       run: |
         python -m pip install . -C "--build-option=--serial"
+
     - name: Return to pytests branch
+      if: ${{ ! contains(env.spec_tags, '@notest') }}
       uses: actions/checkout@v4
       with:
         ref: pytests-develop
         repository: LLNL/UEDGE 
+
     - name: Test with pytest
+      if: ${{ ! contains(env.spec_tags, '@notest') }}
       run: |
         # Create a clean UEDGE instance for every test
         pytest --isolate --tb=long pytests/${{ matrix.tests }} -s
@@ -41,7 +85,7 @@ jobs:
   build_wheels:
     name: Build wheels on ${{ matrix.os }} for Python ${{ matrix.pyver }}
  #   if: github.event_name == 'pull_request'
-    needs: run-all-tests
+#    needs: run-all-tests
     runs-on: ${{ matrix.os }}
     continue-on-error: true
     strategy:
@@ -54,8 +98,42 @@ jobs:
       - name: Checks out repo
         uses: actions/checkout@v4
 
-      - name: Set up macOS-specific paths and libraries
+      - name: Set UBUNTU tags env variables.
+        if: matrix.os == 'ubuntu-latest'
+        run: |
+          # Set "checking" variable to false by default.
+          echo "has_tags=false" >> $GITHUB_ENV
+          # Get your last commit message, not the merge commit.
+          text=$(git log -1 --no-merges --pretty=%B)
+          # Read the commit message into an array split by "#".
+          readarray -d "#" -t commit_message <<< "$text"
+          # Sanity check.
+          echo "the tags are: ${commit_message[1]}"
+          # Add tags and overwrite "checking" variable to true if there are tags.
+          if [[ "${commit_message[1]}" == *"@"*  ]]; then
+            echo "spec_tags=${commit_message[1]}" >> $GITHUB_ENV
+          fi
+
+      - name: Set macOS tags env variables.
         if: (matrix.os == 'macos-13') || (matrix.os == 'macos-14')
+        run: |
+
+          # Set "checking" variable to false by default.
+          echo "has_tags=false" >> $GITHUB_ENV
+          # Get your last commit message, not the merge commit.
+          text=$(git log -1 --no-merges --pretty=%B)
+          # Read the commit message into an array split by "#".
+          echo $(echo $text|tr -d '\n')
+          commit_args=${text#*#}
+          # Sanity check.
+          echo "the tags are: ${commit_message[1]}"
+          # Add tags and overwrite "checking" variable to true if there are tags.
+          if [[ "${commit_args}" == *"@"*  ]]; then
+            echo "spec_tags=${commit_args}" >> $GITHUB_ENV
+          fi
+
+      - name: Set up macOS-specific paths and libraries
+        if: ((matrix.os == 'macos-13') || (matrix.os == 'macos-14')) && ${{ ! contains(env.spec_tags, '@nowheel') }}
         run: |
             # Symlink the correct gfortran compiler 
             ln -s $(brew --prefix)/bin/gfortran-13 $(brew --prefix)/bin/gfortran
@@ -66,6 +144,7 @@ jobs:
             echo "LLVMCLANG=$(brew --prefix llvm@15)" >> $GITHUB_ENV
 
       - name: Build wheels
+        if: ${{ ! contains(env.spec_tags, '@nowheel') }}
         uses: pypa/[email protected]
         env:
             CIBW_BUILD: ${{matrix.pyver}}-*
@@ -76,13 +155,15 @@ jobs:
             LDFLAGS: "-L${{env.LIBOMPPATH }}/lib"
 
       - name: Upload Artifacts
+        if: ${{ ! contains(env.spec_tags, '@nowheel') }}
         uses: actions/upload-artifact@v4
         with:
           name: cibw-wheels-${{ matrix.os }}-${{ matrix.pyver }}-${{ strategy.job-index }}
           path: ./wheelhouse/*.whl
 
   build_wheels_pypy:
     name: Build PyPy wheels on ${{ matrix.os }} 
+    if: false
 #    if: github.event_name == 'pull_request'
     needs: run-all-tests
     runs-on: ${{ matrix.os }}

.github/workflows/wheeltest.yml

@@ -31,7 +31,6 @@ jobs:
           echo "the tags are: ${commit_message[1]}"
           # Add tags and overwrite "checking" variable to true if there are tags.
           if [[ "${commit_message[1]}" == *"@"*  ]]; then
-            echo "has_tags=true" >> $GITHUB_ENV
             echo "spec_tags=${commit_message[1]}" >> $GITHUB_ENV
           fi
 
@@ -47,11 +46,9 @@ jobs:
           echo $(echo $text|tr -d '\n')
           commit_args=${text#*#}
           # Sanity check.
-          echo "Arguments are:"
-          echo $commit_args
+          echo "the tags are: ${commit_message[1]}"
           # Add tags and overwrite "checking" variable to true if there are tags.
           if [[ "${commit_args}" == *"@"*  ]]; then
-            echo "has_tags=true" >> $GITHUB_ENV
             echo "spec_tags=${commit_args}" >> $GITHUB_ENV
           fi