Merge pull request #40 from matrulda/thy_name_is_seqreports

Print version and add seqreports as pipeline name
Molmed · Aug 20, 2020 · ce9af28 · ce9af28
2 parents 37dcb97 + ed422b1
commit ce9af28
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Showing 2 changed files with 11 additions and 3 deletions.
diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-# SNP&amp;Seq summary report pipeline
+# seqreports: SNP&amp;Seq Run folder QC pipeline
 This is a Nextflow pipeline for generating sequencing reports for the SNP&amp;Seq Technology platform, NGI Uppsala, SciLifelab Genomics.
 
 ## Pre-requisites

diff --git a/main.nf b/main.nf
@@ -3,7 +3,7 @@
 nextflow.preview.dsl=2
 /* ####################################################
 
-   SNP & SEQ Run folder QC pipeline
+   seqreports: SNP & SEQ Run folder QC pipeline
 
    #################################################### */
 
@@ -23,7 +23,7 @@ def helpMessage() {
 
     log.info """
 
-    SNP & SEQ Run folder QC pipeline.
+    seqreports: SNP & SEQ Run folder QC pipeline.
 
     This workflow runs the following tools on a run folder:
         * InterOp summary    (http://illumina.github.io/interop/example_summary.html)
@@ -61,6 +61,14 @@ def helpMessage() {
     """
 }
 
+def printVersion() {
+
+    log.info "seqreports v${workflow.manifest.version}"
+
+}
+
+printVersion()
+
 if (params.help || !params.run_folder){
     helpMessage()
     exit 0