Adding JOSS paper reference

NERC-CEH · Aug 8, 2024 · 341074a · 341074a
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diff --git a/CITATION.cff b/CITATION.cff
@@ -33,3 +33,30 @@ keywords:
   - Ecology
   - Survey
 title: "RMAVIS"
+preferred-citation:
+  authors:
+  - family-names: Marshall
+    given-names: Zeke
+    orcid: "https://orcid.org/0000-0001-9260-7827"
+  - family-names: Smart
+    given-names: Simon Mark
+    orcid: "https://orcid.org/0000-0003-2750-7832"
+  - family-names: Harrower
+    given-names: Colin
+    orcid: "https://orcid.org/0000-0001-5070-5293"
+  - family-names: Marrs
+    given-names: Rob
+    orcid: "https://orcid.org/0000-0002-0664-9420"
+  date-published: 2024-08-07
+  doi: 10.21105/joss.06682
+  issn: 2475-9066
+  issue: 100
+  journal: Journal of Open Source Software
+  publisher:
+    name: Open Journals
+  start: 6682
+  title: "RMAVIS v1.0: a Shiny application for the analysis of
+    vegetation survey data and assignment to GB NVC communities."
+  type: article
+  url: "https://joss.theoj.org/papers/10.21105/joss.06682"
+  volume: 9
diff --git a/README.Rmd b/README.Rmd
@@ -65,14 +65,9 @@ these are also made available through the `RMAVIS` package.
 
 ## Reccomended Citation
 
-To reference `RMAVIS` please cite the JOSS paper (in prep)...
+To reference `RMAVIS` please cite the JOSS paper as follows:
 
-Alternatively, use either the Zenodo DOI for all versions as follows:
-
-Marshall, Z., Smart, S. M., Harrower, C., & Marrs, R. (2024). RMAVIS. Zenodo. 
-https://zenodo.org/doi/10.5281/zenodo.10818640
-
-or the DOI associated with a particular release.
+Marshall et al., (2024). RMAVIS v1.0: a Shiny application for the analysis of vegetation survey data and assignment to GB NVC communities. Journal of Open Source Software, 9(100), 6682, https://doi.org/10.21105/joss.06682
 
 ## Feedback
 

diff --git a/README.md b/README.md
@@ -65,14 +65,12 @@ app, these are also made available through the `RMAVIS` package.
 
 ## Reccomended Citation
 
-To reference `RMAVIS` please cite the JOSS paper (in prep)…
+To reference `RMAVIS` please cite the JOSS paper as follows:
 
-Alternatively, use either the Zenodo DOI for all versions as follows:
-
-Marshall, Z., Smart, S. M., Harrower, C., & Marrs, R. (2024). RMAVIS.
-Zenodo. <https://zenodo.org/doi/10.5281/zenodo.10818640>
-
-or the DOI associated with a particular release.
+Marshall et al., (2024). RMAVIS v1.0: a Shiny application for the
+analysis of vegetation survey data and assignment to GB NVC communities.
+Journal of Open Source Software, 9(100), 6682,
+<https://doi.org/10.21105/joss.06682>
 
 ## Feedback
 

diff --git a/inst/app/README.md b/inst/app/README.md
@@ -65,14 +65,12 @@ app, these are also made available through the `RMAVIS` package.
 
 ## Reccomended Citation
 
-To reference `RMAVIS` please cite the JOSS paper (in prep)…
+To reference `RMAVIS` please cite the JOSS paper as follows:
 
-Alternatively, use either the Zenodo DOI for all versions as follows:
-
-Marshall, Z., Smart, S. M., Harrower, C., & Marrs, R. (2024). RMAVIS.
-Zenodo. <https://zenodo.org/doi/10.5281/zenodo.10818640>
-
-or the DOI associated with a particular release.
+Marshall et al., (2024). RMAVIS v1.0: a Shiny application for the
+analysis of vegetation survey data and assignment to GB NVC communities.
+Journal of Open Source Software, 9(100), 6682,
+<https://doi.org/10.21105/joss.06682>
 
 ## Feedback
 

diff --git a/inst/app/docs/documentation.Rmd b/inst/app/docs/documentation.Rmd
@@ -784,17 +784,8 @@ example dataset.
 
 # Recommended Citation
 
-To reference `RMAVIS` please cite the JOSS paper (in prep)...
+To reference `RMAVIS` please cite the JOSS paper:
 
-```
-
-```
-
-Alternatively, use either the Zenodo DOI for all versions as follows:
-
-Marshall, Z., Smart, S. M., Harrower, C., & Marrs, R. (2024). RMAVIS. Zenodo. 
-https://zenodo.org/doi/10.5281/zenodo.10818640
-
-or the DOI associated with a particular release.
+Marshall et al., (2024). RMAVIS v1.0: a Shiny application for the analysis of vegetation survey data and assignment to GB NVC communities. Journal of Open Source Software, 9(100), 6682, https://doi.org/10.21105/joss.06682
 
 # References
diff --git a/inst/app/www/documentation.html b/inst/app/www/documentation.html
@@ -2571,12 +2571,8 @@ <h1><span class="header-section-number">3</span> Acknowledgements</h1>
 </div>
 <div id="recommended-citation" class="section level1" number="4">
 <h1><span class="header-section-number">4</span> Recommended Citation</h1>
-<p>To reference <code>RMAVIS</code> please cite the JOSS paper (in prep)…</p>
-<pre><code></code></pre>
-<p>Alternatively, use either the Zenodo DOI for all versions as follows:</p>
-<p>Marshall, Z., Smart, S. M., Harrower, C., &amp; Marrs, R. (2024). RMAVIS. Zenodo.
-<a href="https://zenodo.org/doi/10.5281/zenodo.10818640" class="uri">https://zenodo.org/doi/10.5281/zenodo.10818640</a></p>
-<p>or the DOI associated with a particular release.</p>
+<p>To reference <code>RMAVIS</code> please cite the JOSS paper:</p>
+<p>Marshall et al., (2024). RMAVIS v1.0: a Shiny application for the analysis of vegetation survey data and assignment to GB NVC communities. Journal of Open Source Software, 9(100), 6682, <a href="https://doi.org/10.21105/joss.06682" class="uri">https://doi.org/10.21105/joss.06682</a></p>
 </div>
 <div id="references" class="section level1 unnumbered">
 <h1>References</h1>