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Use directory names to derive pipeline experiment names #61

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metazool merged 2 commits into main from pipeline_filenames

Dec 24, 2024

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metazool commented Dec 17, 2024 •

edited

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Adds argparse arguments to call this either in a container or via cron
Fixes an issue where experiment_name was not being passed through all pipeline tasks
Uses the agreed file naming conventions (see Naming files based on directory naming conventions #60 ) to derive a unique experiment name for images in a collection
Tiny refactoring of the name parsing into a standalone function

metazool added 2 commits

December 17, 2024 13:19


          rename decollage -> flowcam, separate out filename parsing

9909b75


          infer experiment name from directory, or supply, and passthru

99b9d1c

metazool requested review from albags and Kzra

December 17, 2024 14:13

metazool linked an issue

that may be closed by this pull request

Naming files based on directory naming conventions #60

Closed

metazool merged commit cececc7 into main

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metazool deleted the pipeline_filenames branch

December 24, 2024 12:12

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