QC COB Compliance suite #1
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| # Basic ODK workflow | |
| name: QC COB Compliance suite | |
| on: | |
| # Runs once per month | |
| schedule: | |
| - cron: "0 0 1 * *" | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "ontology_qc" | |
| ontology_qc: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| container: obolibrary/odkfull:v1.5.2 | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| - name: Run COB Integration test suite | |
| env: | |
| DEFAULT_BRANCH: master | |
| run: cd src/ontology && mkdir -p reports tmp && make ROBOT_ENV='ROBOT_JAVA_ARGS=-Xmx6G' cob_test IMP=false PAT=false -B | |
| - name: Read and crop the contents of SUMMARY.txt | |
| id: read_summary | |
| run: | | |
| summary_content=$(cat products/SUMMARY.txt) | |
| max_length=65500 # Slightly less than the max limit to account for metadata or other content | |
| if [ ${#summary_content} -gt $max_length ]; then | |
| summary_content="${summary_content:0:$max_length}" | |
| summary_content="${summary_content}\n\n...Content cropped due to length limits." | |
| fi | |
| # Wrap the content in a collapsible details block | |
| wrapped_content="<details><summary>Latest integration report</summary>\n\n${summary_content}\n\n</details>" | |
| echo "::set-output name=summary::${wrapped_content}" | |
| shell: bash | |
| - name: Post summary to the issue | |
| run: gh issue comment 278 --body "$SUMMARY_CONTENT" | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| SUMMARY_CONTENT: ${{ steps.read_summary.outputs.summary }} | |