The main focus on this update is to reduce the number of false positive calls by adjusting default parameters, and introducing new filters. Additional improvements to plotting. The plotting script was not included in tag 0.5.0.
Feature: Addition of minimum fusion fraction filter (--min-fusion-fraction). Increased specificity at a small cost to sensitivity.
Feature: Addition of lncRNA filtering (--gtf-transcript-allow-lncRNA). Increased specificity at a small cost to sensitivity.
Feature: Increasing min map quality to 10
Feature: Increasing min identity to 93%
Feature: Adding transcript count for fusion support (XC), and total count (TC) to output.
Bug fix: Fix fofn hang
Bug fix: Ensure unique fusion IDs